Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OJHOKIDC_3674053674754WalR9.90e-108transcriptional regulatory protein80.3499.57EPH95667

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
OJHOKIDC_11.00.01.0
OJHOKIDC_30.01.00.0
OJHOKIDC_41.00.01.0
OJHOKIDC_51.00.01.0
OJHOKIDC_61.00.01.0
OJHOKIDC_81.00.01.0
OJHOKIDC_91.00.01.0
OJHOKIDC_111.00.01.0
OJHOKIDC_121.00.01.0
OJHOKIDC_180.01.00.0
OJHOKIDC_211.00.01.0
OJHOKIDC_221.00.01.0
OJHOKIDC_231.00.01.0
OJHOKIDC_241.00.01.0
OJHOKIDC_291.00.01.0
OJHOKIDC_310.01.00.0
OJHOKIDC_321.00.01.0
OJHOKIDC_331.00.01.0
OJHOKIDC_341.00.01.0
OJHOKIDC_351.00.01.0
OJHOKIDC_361.00.01.0
OJHOKIDC_371.00.01.0
OJHOKIDC_381.00.01.0
OJHOKIDC_401.00.01.0
OJHOKIDC_411.00.01.0
OJHOKIDC_420.01.00.0
OJHOKIDC_431.00.01.0
OJHOKIDC_440.01.00.0
OJHOKIDC_451.00.01.0
OJHOKIDC_461.00.01.0
OJHOKIDC_471.00.01.0
OJHOKIDC_491.00.01.0
OJHOKIDC_501.00.01.0
OJHOKIDC_511.00.01.0
OJHOKIDC_521.00.01.0
OJHOKIDC_580.01.00.0
OJHOKIDC_670.01.00.0
OJHOKIDC_700.01.00.0
OJHOKIDC_710.01.00.0
OJHOKIDC_720.01.00.0
OJHOKIDC_731.00.01.0
OJHOKIDC_741.00.01.0
OJHOKIDC_751.00.01.0
OJHOKIDC_761.00.01.0
OJHOKIDC_771.00.01.0
OJHOKIDC_781.00.01.0
OJHOKIDC_801.00.01.0
OJHOKIDC_810.01.00.0
OJHOKIDC_821.00.01.0
OJHOKIDC_831.00.01.0
OJHOKIDC_841.00.01.0
OJHOKIDC_861.00.01.0
OJHOKIDC_890.01.00.0
OJHOKIDC_901.00.01.0
OJHOKIDC_921.00.01.0
OJHOKIDC_931.00.01.0
OJHOKIDC_951.00.01.0
OJHOKIDC_961.00.01.0
OJHOKIDC_971.00.01.0
OJHOKIDC_991.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
OJHOKIDC_4149719477FalseSiphoviridaeVOG4581, VOG4544, VOG4556, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4910, VOG4605
OJHOKIDC_32131216815FalseMyoviridaeVOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4918, VOG4545, VOG4699, VOG1352, VOG1883, VOG1353
OJHOKIDC_35290928977FalseMyoviridaeVOG0573, VOG1348, VOG1433, VOG1956, VOG4910, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4710, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG2545, VOG0376, VOG0275, VOG0796, VOG0198, VOG0586
OJHOKIDC_45422127013FalseMyoviridaeVOG6540, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG5904, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements