Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
KAOIGJOH_199301945rep38651 / 90387.56CP005943

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
KAOIGJOH_10.01.00.0
KAOIGJOH_20.01.00.0
KAOIGJOH_130.01.00.0
KAOIGJOH_241.00.01.0
KAOIGJOH_340.01.00.0
KAOIGJOH_450.01.00.0
KAOIGJOH_550.01.00.0
KAOIGJOH_660.01.00.0
KAOIGJOH_720.01.00.0
KAOIGJOH_770.01.00.0
KAOIGJOH_880.01.00.0
KAOIGJOH_990.01.00.0
KAOIGJOH_1100.01.00.0
KAOIGJOH_1330.01.00.0
KAOIGJOH_1440.01.00.0
KAOIGJOH_1660.01.00.0
KAOIGJOH_1880.01.00.0
KAOIGJOH_1991.00.01.0
KAOIGJOH_2100.01.00.0
KAOIGJOH_2210.01.00.0
KAOIGJOH_2220.01.00.0
KAOIGJOH_2330.01.00.0
KAOIGJOH_2440.01.00.0
KAOIGJOH_2550.01.00.0
KAOIGJOH_2660.01.00.0
KAOIGJOH_2751.00.01.0
KAOIGJOH_2861.00.01.0
KAOIGJOH_2960.01.00.0
KAOIGJOH_3070.01.00.0
KAOIGJOH_3170.01.00.0
KAOIGJOH_3261.00.01.0
KAOIGJOH_3280.01.00.0
KAOIGJOH_3290.01.00.0
KAOIGJOH_3391.00.01.0
KAOIGJOH_3500.01.00.0
KAOIGJOH_3681.00.01.0
KAOIGJOH_3770.01.00.0
KAOIGJOH_3850.01.00.0
KAOIGJOH_3881.00.01.0
KAOIGJOH_3900.01.00.0
KAOIGJOH_3911.00.01.0
KAOIGJOH_3920.01.00.0
KAOIGJOH_3941.00.01.0
KAOIGJOH_3951.00.01.0
KAOIGJOH_3960.01.00.0
KAOIGJOH_3971.00.01.0
KAOIGJOH_4000.01.00.0
KAOIGJOH_4020.01.00.0
KAOIGJOH_4040.01.00.0
KAOIGJOH_4071.00.01.0
KAOIGJOH_4080.01.00.0
KAOIGJOH_4090.01.00.0
KAOIGJOH_4121.00.01.0
KAOIGJOH_4170.01.00.0
KAOIGJOH_4190.01.00.0
KAOIGJOH_4221.00.01.0
KAOIGJOH_4260.01.00.0
KAOIGJOH_4321.00.01.0
KAOIGJOH_4460.01.00.0
KAOIGJOH_4510.01.00.0
KAOIGJOH_4551.00.01.0
KAOIGJOH_4590.01.00.0
KAOIGJOH_4611.00.01.0
KAOIGJOH_4710.01.00.0
KAOIGJOH_4751.00.01.0
KAOIGJOH_4820.01.00.0
KAOIGJOH_4900.01.00.0
KAOIGJOH_4910.01.00.0
KAOIGJOH_4920.01.00.0
KAOIGJOH_4930.01.00.0
KAOIGJOH_4960.01.00.0
KAOIGJOH_4971.00.01.0
KAOIGJOH_4980.01.00.0
KAOIGJOH_4990.01.00.0
KAOIGJOH_5000.01.00.0
KAOIGJOH_5010.01.00.0
KAOIGJOH_5020.01.00.0
KAOIGJOH_5040.01.00.0
KAOIGJOH_5050.01.00.0
KAOIGJOH_5060.01.00.0
KAOIGJOH_5070.01.00.0
KAOIGJOH_5090.01.00.0
KAOIGJOH_5100.01.00.0
KAOIGJOH_5110.01.00.0
KAOIGJOH_5120.01.00.0
KAOIGJOH_5131.00.01.0
KAOIGJOH_5150.01.00.0
KAOIGJOH_5180.01.00.0
KAOIGJOH_5200.01.00.0
KAOIGJOH_5220.01.00.0
KAOIGJOH_5230.01.00.0
KAOIGJOH_5260.01.00.0
KAOIGJOH_5270.01.00.0
KAOIGJOH_5360.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
KAOIGJOH_4932305428031FalseMyoviridaeVOG0384, VOG0384, VOG0384, VOG0382, VOG0382, VOG0083
KAOIGJOH_5267370285366FalseMyoviridaeVOG1411, VOG0382, VOG4178, VOG0996, VOG4927, VOG4410, VOG4410, VOG6396, VOG6085, VOG4548

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements