Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KLOLMKHI_1 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KLOLMKHI_1 | 735581 | 743588 | False | Siphoviridae | VOG4588, VOG0198, VOG4606, VOG4853, VOG0831, VOG10533, VOG8757, VOG2687 |
| KLOLMKHI_1 | 896361 | 904440 | False | Myoviridae | VOG9667, VOG5353, VOG4552, VOG8241, VOG3854, VOG9667, VOG9042, VOG0685, VOG0283, VOG5046, VOG4566, VOG0226, VOG9667, VOG9098, VOG0198 |
| KLOLMKHI_1 | 905469 | 933430 | False | Myoviridae | VOG4618, VOG7442, VOG8462, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG3888, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG10043, VOG9945 |
| KLOLMKHI_1 | 1258630 | 1285892 | False | Myoviridae | VOG7017, VOG0861, VOG4705, VOG9945, VOG5763, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4918, VOG5904, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG6132, VOG1915, VOG4824, VOG4564, VOG1912, VOG7407, VOG3699 |
| KLOLMKHI_1 | 1404061 | 1441183 | False | Siphoviridae | VOG8608, VOG1594, VOG8355, VOG4659, VOG4633, VOG4545, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG1345, VOG0198, VOG10904, VOG0327, VOG10904, VOG4677, VOG6970, VOG4966, VOG4609, VOG4632, VOG6545, VOG0322, VOG10904, VOG5562, VOG5998, VOG0195, VOG0275, VOG4548, VOG10413, VOG9708 |
Phigaro v2.4.0 (Database: Jan. 2024 release)