Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OHBEBPFO_10 | 22588 | 22785 | CspA | 9.82e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| OHBEBPFO_10 | 22588 | 22785 | CspR | 1.03e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OHBEBPFO_1 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_2 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_3 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_4 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_5 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_6 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_7 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_8 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_9 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_10 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_11 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_12 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_13 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_14 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_15 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_16 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_17 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_18 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_19 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_20 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_21 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_22 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_23 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_24 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_25 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_26 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_27 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_28 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_29 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_30 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_31 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_32 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_33 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_34 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_35 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_36 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_37 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_38 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_39 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_40 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_41 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_42 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_43 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_44 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_45 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_46 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_47 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_48 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_49 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_50 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_51 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_52 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_53 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_54 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_55 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_56 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_57 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_58 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_59 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_60 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_61 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_62 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_63 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_64 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_65 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_66 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_67 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_68 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_69 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_70 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_71 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_72 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_73 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_74 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_75 | 1.0 | 0.0 | 1.0 |
| OHBEBPFO_76 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_77 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_78 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_79 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_80 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_81 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_82 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_83 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_84 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_85 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_86 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_87 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_88 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_89 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_90 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_91 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_92 | 0.0 | 1.0 | 0.0 |
| OHBEBPFO_93 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OHBEBPFO_21 | 3947 | 40473 | False | Siphoviridae | VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG0249, VOG3477, VOG0198, VOG8685, VOG0189, VOG8647, VOG0514, VOG0226, VOG0186, VOG1309, VOG2228, VOG0095 |
| OHBEBPFO_80 | 16489 | 34185 | False | Myoviridae | VOG10457, VOG8295, VOG0025, VOG6085, VOG0226, VOG0205, VOG0384, VOG0382, VOG0083 |
Phigaro v2.4.0 (Database: Jan. 2024 release)