Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EBDCOJBC_1 | 18475 | 20448 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| EBDCOJBC_244 | 3188 | 3988 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| EBDCOJBC_244 | 1839 | 2975 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EBDCOJBC_244 | 3188 | 3988 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| EBDCOJBC_1 | 18523 | 20448 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| EBDCOJBC_244 | 1809 | 2975 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EBDCOJBC_244 | 3191 | 3988 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| EBDCOJBC_1 | 18523 | 20445 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| EBDCOJBC_244 | 1809 | 2972 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.48 | 100.00 | WP_008651082.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EBDCOJBC_247 | 10868 | 9288 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EBDCOJBC_85 | 1730 | 2409 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EBDCOJBC_1 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_2 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_3 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_4 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_5 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_6 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_7 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_8 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_9 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_10 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_11 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_12 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_13 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_14 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_15 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_16 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_17 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_18 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_19 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_20 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_21 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_22 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_23 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_24 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_25 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_26 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_27 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_28 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_29 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_30 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_31 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_32 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_33 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_34 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_35 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_36 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_37 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_38 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_39 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_40 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_41 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_42 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_43 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_44 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_45 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_46 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_47 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_48 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_49 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_50 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_51 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_52 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_53 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_54 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_55 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_56 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_57 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_58 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_59 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_60 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_61 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_62 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_63 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_64 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_65 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_66 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_67 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_68 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_69 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_70 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_71 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_72 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_73 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_74 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_75 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_76 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_77 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_78 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_79 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_80 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_82 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_83 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_84 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_85 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_86 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_87 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_88 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_89 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_90 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_91 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_92 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_93 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_94 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_95 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_96 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_97 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_99 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_100 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_101 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_102 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_103 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_104 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_105 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_106 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_107 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_108 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_109 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_111 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_112 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_113 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_114 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_115 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_116 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_117 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_118 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_119 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_120 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_121 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_122 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_123 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_124 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_125 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_126 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_127 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_128 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_129 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_130 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_131 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_132 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_133 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_134 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_135 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_136 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_137 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_138 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_139 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_147 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_158 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_168 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_177 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_181 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_184 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_187 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_189 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_190 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_196 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_201 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_208 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_211 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_212 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_213 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_214 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_215 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_216 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_217 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_218 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_219 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_220 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_221 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_222 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_223 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_224 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_225 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_226 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_227 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_228 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_229 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_230 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_231 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_232 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_233 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_234 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_235 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_236 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_237 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_238 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_239 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_240 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_241 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_242 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_243 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_244 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_245 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_246 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_247 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_248 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_249 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_250 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_251 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_252 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_253 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_254 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_255 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_256 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_257 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_258 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_259 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_260 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_261 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_262 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_263 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_264 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_265 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_266 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_267 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_268 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_269 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_270 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_271 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_272 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_273 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_274 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_275 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_276 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_277 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_278 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_279 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_280 | 0.0 | 1.0 | 0.0 |
| EBDCOJBC_281 | 1.0 | 0.0 | 1.0 |
| EBDCOJBC_282 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EBDCOJBC_208 | 18808 | 35434 | False | Siphoviridae | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)