Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNILNHJJ_6 | 119498 | 118794 | WalR | 1.97e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DNILNHJJ_10 | 24314 | 24117 | CspR | 5.87e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DNILNHJJ_1 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_2 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_3 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_4 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_5 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_6 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_7 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_8 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_9 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_10 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_11 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_12 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_13 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_14 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_15 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_16 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_17 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_18 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_19 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_20 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_21 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_22 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_23 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_24 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_25 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_26 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_27 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_28 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_29 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_30 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_31 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_32 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_33 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_34 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_35 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_36 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_37 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_38 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_39 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_40 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_41 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_42 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_43 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_44 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_45 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_46 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_47 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_48 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_49 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_50 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_51 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_52 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_53 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_54 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_57 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_58 | 0.0 | 1.0 | 0.0 |
| DNILNHJJ_59 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_61 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_62 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_63 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_64 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_65 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_66 | 1.0 | 0.0 | 1.0 |
| DNILNHJJ_67 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DNILNHJJ_10 | 96322 | 106442 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
| DNILNHJJ_14 | 60437 | 70754 | False | Siphoviridae | VOG0274, VOG0221, VOG4581, VOG1886, VOG0202, VOG4556, VOG4568, VOG4553, VOG0205 |
| DNILNHJJ_37 | 3493 | 18128 | False | Siphoviridae | VOG3307, VOG0044, VOG3643, VOG0152, VOG0195, VOG9759, VOG0327, VOG4606, VOG4606, VOG6545, VOG4548, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG0807, VOG4552, VOG6463, VOG7581, VOG6914, VOG6914 |
Phigaro v2.4.0 (Database: Jan. 2024 release)