Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FFPOBNGK_10 | 43158 | 46721 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.48 | 100.08 | NC_008618.1 |
| FFPOBNGK_22 | 1398 | 2597 | tet(W) | ARO:3000194 | tet(W) | 99.00 | 62.44 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FFPOBNGK_22 | 677 | 2597 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.95 | 100.00 | DQ060146 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FFPOBNGK_22 | 1383 | 2594 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | PARTIALX | 98.27 | 63.22 | WP_009305318.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FFPOBNGK_1 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_2 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_3 | 1.0 | 0.0 | 1.0 |
| FFPOBNGK_4 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_5 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_6 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_7 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_8 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_9 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_10 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_11 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_12 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_13 | 1.0 | 0.0 | 1.0 |
| FFPOBNGK_14 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_15 | 1.0 | 0.0 | 1.0 |
| FFPOBNGK_16 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_18 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_19 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_20 | 0.0 | 1.0 | 0.0 |
| FFPOBNGK_21 | 1.0 | 0.0 | 1.0 |
| FFPOBNGK_22 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FFPOBNGK_2 | 163947 | 185467 | False | Siphoviridae | VOG5101, VOG0720, VOG2894, VOG4555, VOG4572, VOG1210, VOG5601, VOG5793, VOG4605, VOG3416, VOG10972, VOG9657, VOG2021, VOG9502, VOG0731 |
Phigaro v2.4.0 (Database: Jan. 2024 release)