Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PBBELLAE_21 | 38260 | 38457 | CspA | 2.75e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| PBBELLAE_21 | 38260 | 38454 | CspR | 1.19e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PBBELLAE_36 | 13441 | 14345 | rep38 | 915 / 1104 | 82.19 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PBBELLAE_1 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_2 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_3 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_4 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_5 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_6 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_7 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_8 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_9 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_10 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_11 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_12 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_13 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_14 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_15 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_16 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_17 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_18 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_19 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_20 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_21 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_22 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_23 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_24 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_25 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_26 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_27 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_28 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_29 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_30 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_31 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_32 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_33 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_34 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_35 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_36 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_37 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_38 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_39 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_40 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_41 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_42 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_43 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_44 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_45 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_46 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_47 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_48 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_49 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_50 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_51 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_52 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_53 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_54 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_55 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_56 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_57 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_58 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_59 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_60 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_61 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_62 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_63 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_64 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_65 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_66 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_67 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_68 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_69 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_70 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_71 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_72 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_73 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_74 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_75 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_76 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_77 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_78 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_79 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_80 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_81 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_82 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_83 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_84 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_85 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_86 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_87 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_88 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_89 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_90 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_92 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_93 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_94 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_95 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_96 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_97 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_98 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_99 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_100 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_101 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_102 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_104 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_105 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_106 | 0.0 | 1.0 | 0.0 |
| PBBELLAE_107 | 1.0 | 0.0 | 1.0 |
| PBBELLAE_108 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PBBELLAE_2 | 11605 | 42064 | False | Siphoviridae | VOG9231, VOG0248, VOG6823, VOG4552, VOG1436, VOG1302, VOG2228, VOG1309, VOG0186, VOG0226, VOG4566, VOG0189, VOG0536, VOG0198, VOG3477, VOG0249, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG10914, VOG1319, VOG4713, VOG5660, VOG0724, VOG0799, VOG0725, VOG4545, VOG0727, VOG4599, VOG0648 |
Phigaro v2.4.0 (Database: Jan. 2024 release)