Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ACMFMEOL_85 | 72003 | 72197 | CspA | 1.11e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACMFMEOL_1 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_2 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_13 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_24 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_35 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_46 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_57 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_59 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_60 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_61 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_62 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_63 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_64 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_65 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_66 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_67 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_68 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_69 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_70 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_71 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_72 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_73 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_74 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_75 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_76 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_77 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_78 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_79 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_80 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_81 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_82 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_83 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_84 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_85 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_86 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_87 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_88 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_89 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_90 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_91 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_92 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_93 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_94 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_95 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_96 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_97 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_98 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_99 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_100 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_101 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_102 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_103 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_104 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_105 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_106 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_107 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_108 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_109 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_110 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_111 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_112 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_113 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_114 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_115 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_116 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_117 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_118 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_119 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_120 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_121 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_122 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_123 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_124 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_125 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_126 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_127 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_128 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_129 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_130 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_131 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_132 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_133 | 0.0 | 1.0 | 0.0 |
| ACMFMEOL_134 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_135 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_136 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_138 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_139 | 1.0 | 0.0 | 1.0 |
| ACMFMEOL_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACMFMEOL_63 | 88198 | 96903 | False | Siphoviridae | VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0198, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)