Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CAGEDGCJ_130 | 744 | 1535 | aadA | ARO:3002601 | aadA | 100.00 | 127.76 | AF550679.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CAGEDGCJ_130 | 744 | 1532 | aadA1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | EXACTX | 100.00 | 100.00 | WP_001206316.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CAGEDGCJ_130 | 1953 | 2083 | ColRNAI | 131 / 130 | 87.02 | DQ298019 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CAGEDGCJ_1 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_2 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_3 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_4 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_5 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_6 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_7 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_8 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_9 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_10 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_11 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_13 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_14 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_15 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_16 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_17 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_18 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_19 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_20 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_21 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_22 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_23 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_25 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_26 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_27 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_28 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_29 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_30 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_32 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_33 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_34 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_35 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_36 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_37 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_38 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_39 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_40 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_42 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_43 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_44 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_45 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_46 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_47 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_48 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_49 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_51 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_52 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_53 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_54 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_55 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_56 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_57 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_58 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_59 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_60 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_61 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_62 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_63 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_65 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_67 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_68 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_70 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_71 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_72 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_73 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_74 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_75 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_76 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_78 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_79 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_80 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_81 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_83 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_86 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_87 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_88 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_89 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_90 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_91 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_94 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_95 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_96 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_97 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_98 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_100 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_101 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_102 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_104 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_106 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_107 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_109 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_110 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_112 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_113 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_114 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_117 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_118 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_119 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_121 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_122 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_124 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_127 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_130 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_135 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_136 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_137 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_138 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_146 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_157 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_168 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_180 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_181 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_182 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_183 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_185 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_186 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_187 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_188 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_190 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_191 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_193 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_194 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_195 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_196 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_197 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_198 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_199 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_200 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_201 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_202 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_203 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_204 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_205 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_206 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_207 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_208 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_209 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_212 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_213 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_214 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_215 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_216 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_217 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_218 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_219 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_220 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_221 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_222 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_223 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_224 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_225 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_226 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_227 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_228 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_229 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_230 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_231 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_232 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_233 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_234 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_236 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_238 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_239 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_240 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_241 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_242 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_243 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_244 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_245 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_246 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_247 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_248 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_249 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_250 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_251 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_252 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_253 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_254 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_255 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_256 | 0.0 | 1.0 | 0.0 |
| CAGEDGCJ_257 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_258 | 1.0 | 0.0 | 1.0 |
| CAGEDGCJ_259 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CAGEDGCJ_15 | 31610 | 44207 | False | Myoviridae / Siphoviridae | VOG4705, VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708 |
| CAGEDGCJ_28 | 4283 | 22642 | False | Siphoviridae | VOG7017, VOG4659, VOG4633, VOG4545, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553 |
| CAGEDGCJ_185 | 32373 | 34502 | False | Unknown | VOG11075, VOG9667, VOG1356, VOG7236 |
| CAGEDGCJ_185 | 43863 | 72456 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5334 |
| CAGEDGCJ_195 | 15789 | 44181 | False | Myoviridae | VOG4705, VOG9945, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198 |
| CAGEDGCJ_251 | 925 | 20846 | False | Siphoviridae | VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4545, VOG4633, VOG4659, VOG8355, VOG1594 |
Phigaro v2.4.0 (Database: Jan. 2024 release)