Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPCPIMCC_133 | 746 | 1537 | aadA | ARO:3002601 | aadA | 100.00 | 127.76 | AF550679.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPCPIMCC_133 | 746 | 1534 | aadA1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | EXACTX | 100.00 | 100.00 | WP_001206316.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JPCPIMCC_133 | 1955 | 2085 | ColRNAI | 131 / 130 | 87.02 | DQ298019 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JPCPIMCC_1 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_2 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_3 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_4 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_5 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_6 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_7 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_8 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_9 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_10 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_12 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_13 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_14 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_16 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_17 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_18 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_19 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_21 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_22 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_23 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_24 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_25 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_26 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_27 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_28 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_29 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_30 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_31 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_32 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_33 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_34 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_35 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_36 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_37 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_38 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_39 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_40 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_41 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_42 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_43 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_44 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_46 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_48 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_49 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_50 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_51 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_52 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_53 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_54 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_55 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_56 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_57 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_58 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_59 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_60 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_61 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_62 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_64 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_65 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_66 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_67 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_69 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_72 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_73 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_74 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_75 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_76 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_77 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_78 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_79 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_81 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_82 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_83 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_85 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_86 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_87 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_88 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_89 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_90 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_91 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_93 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_94 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_95 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_96 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_98 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_99 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_100 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_107 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_108 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_110 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_111 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_112 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_113 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_114 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_115 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_117 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_118 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_119 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_120 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_121 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_122 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_123 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_124 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_125 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_127 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_129 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_130 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_132 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_133 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_135 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_136 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_137 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_138 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_139 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_140 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_141 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_142 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_143 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_144 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_145 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_146 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_149 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_150 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_157 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_158 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_163 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_175 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_176 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_177 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_178 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_179 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_183 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_185 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_186 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_187 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_188 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_189 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_190 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_191 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_192 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_193 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_194 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_196 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_197 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_198 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_200 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_201 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_202 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_203 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_204 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_205 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_207 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_208 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_209 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_210 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_211 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_212 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_213 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_214 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_215 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_216 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_217 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_218 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_219 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_220 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_221 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_222 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_223 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_224 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_225 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_226 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_227 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_228 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_229 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_230 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_231 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_232 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_233 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_234 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_235 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_236 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_237 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_238 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_239 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_240 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_241 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_243 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_244 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_245 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_246 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_248 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_249 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_250 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_251 | 1.0 | 0.0 | 1.0 |
| JPCPIMCC_252 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_253 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_254 | 0.0 | 1.0 | 0.0 |
| JPCPIMCC_255 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JPCPIMCC_179 | 4052 | 29880 | False | Myoviridae | VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232 |
| JPCPIMCC_223 | 72960 | 102978 | False | Myoviridae | VOG4693, VOG0198, VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5334 |
| JPCPIMCC_233 | 28807 | 54588 | False | Siphoviridae | VOG0327, VOG3349, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG4633, VOG4659, VOG7017, VOG6540, VOG4904 |
Phigaro v2.4.0 (Database: Jan. 2024 release)