Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IBJLFCCN_69 | 9376 | 8675 | WalR | 1.52e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IBJLFCCN_65 | 4997 | 5899 | rep38 | 903 / 903 | 99.11 | CP005943 |
| IBJLFCCN_67 | 5126 | 6055 | rep28 | 930 / 930 | 98.49 | CP003162 |
| IBJLFCCN_85 | 2105 | 3172 | repUS73 | 1068 / 1101 | 95.79 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBJLFCCN_1 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_2 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_3 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_4 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_5 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_6 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_7 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_8 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_9 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_10 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_13 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_24 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_29 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_30 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_31 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_32 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_33 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_34 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_35 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_36 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_37 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_38 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_39 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_40 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_41 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_42 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_43 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_44 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_45 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_46 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_47 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_48 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_49 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_50 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_51 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_52 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_53 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_54 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_55 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_56 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_57 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_58 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_59 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_60 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_61 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_62 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_63 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_64 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_65 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_66 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_67 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_68 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_69 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_70 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_71 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_72 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_73 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_74 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_75 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_76 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_77 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_78 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_79 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_80 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_81 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_82 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_83 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_84 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_85 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_86 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_87 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_88 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_89 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_91 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_92 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_93 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_94 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_95 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_96 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_97 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_98 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_99 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_100 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_101 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_102 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_103 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_104 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_105 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_106 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_107 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_108 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_109 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_110 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_111 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_113 | 0.0 | 1.0 | 0.0 |
| IBJLFCCN_114 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_115 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_116 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_117 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_118 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_119 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_120 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_121 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_122 | 1.0 | 0.0 | 1.0 |
| IBJLFCCN_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBJLFCCN_30 | 3891 | 9816 | False | Unknown | VOG0198, VOG4010, VOG0044, VOG6005, VOG4693, VOG7236, VOG0186 |
| IBJLFCCN_37 | 5645 | 35499 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0045, VOG0198, VOG4010, VOG0044, VOG2672, VOG0189, VOG8647, VOG0514, VOG0226, VOG0283, VOG0321 |
| IBJLFCCN_46 | 4273 | 15032 | False | Siphoviridae | VOG8908, VOG0198, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609 |
| IBJLFCCN_49 | 329 | 21102 | False | Myoviridae | VOG1912, VOG4564, VOG4865, VOG1915, VOG2779, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6131, VOG5068, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691 |
| IBJLFCCN_80 | 1830 | 28064 | False | Siphoviridae | VOG4705, VOG5318, VOG9955, VOG10972, VOG4599, VOG4605, VOG8263, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG1886, VOG4581, VOG4841, VOG4673 |
Phigaro v2.4.0 (Database: Jan. 2024 release)