Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BLCLGBHF_8 | 120865 | 120161 | WalR | 1.64e-114 | transcriptional regulatory protein | 83.83 | 100.00 | EPH95667 |
| BLCLGBHF_45 | 11875 | 11681 | CspR | 1.27e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| BLCLGBHF_45 | 11875 | 11678 | CspA | 1.95e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BLCLGBHF_7 | 2929 | 3968 | rep38 | 1042 / 1104 | 88.20 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BLCLGBHF_6 | 1.0 | 0.0 | 1.0 |
| BLCLGBHF_7 | 1.0 | 0.0 | 1.0 |
| BLCLGBHF_8 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_9 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_10 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_11 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_12 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_13 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_14 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_15 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_16 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_17 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_18 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_19 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_20 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_21 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_22 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_23 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_24 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_25 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_26 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_27 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_28 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_29 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_30 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_31 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_32 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_33 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_34 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_35 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_36 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_37 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_38 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_39 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_40 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_41 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_42 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_43 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_44 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_45 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_46 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_47 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_48 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_49 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_50 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_51 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_52 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_53 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_54 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_55 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_56 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_57 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_58 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_59 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_60 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_61 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_62 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_63 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_64 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_65 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_66 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_67 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_68 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_69 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_70 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_71 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_72 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_73 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_74 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_75 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_76 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_77 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_78 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_79 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_80 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_81 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_82 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_83 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_84 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_85 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_86 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_87 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_88 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_89 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_90 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_91 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_92 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_93 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_94 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_95 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_96 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_97 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_98 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_99 | 1.0 | 0.0 | 1.0 |
| BLCLGBHF_100 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_101 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_102 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_103 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_104 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_105 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_106 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_108 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_109 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_110 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_111 | 1.0 | 0.0 | 1.0 |
| BLCLGBHF_112 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_113 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_114 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_115 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_116 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_117 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_118 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_120 | 1.0 | 0.0 | 1.0 |
| BLCLGBHF_121 | 0.0 | 1.0 | 0.0 |
| BLCLGBHF_122 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BLCLGBHF_8 | 122433 | 132942 | False | Siphoviridae | VOG0198, VOG0204, VOG4553, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
| BLCLGBHF_25 | 2315 | 25508 | False | Siphoviridae | VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG8239, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG7810, VOG0741, VOG4841, VOG0198, VOG6005, VOG0189, VOG4566, VOG4566, VOG5073 |
| BLCLGBHF_32 | 1394 | 35638 | False | Siphoviridae | VOG9888, VOG8917, VOG9997, VOG3498, VOG4619, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG4694, VOG4673, VOG0044, VOG0586, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG9667, VOG4548, VOG0321, VOG8925, VOG8222, VOG1563 |
| BLCLGBHF_35 | 919 | 13123 | False | Siphoviridae | VOG0799, VOG5660, VOG0723, VOG4713, VOG1887, VOG3434, VOG4564, VOG0720, VOG10227, VOG0796, VOG1183 |
| BLCLGBHF_35 | 17536 | 25383 | False | Siphoviridae | VOG4855, VOG0186, VOG1309, VOG2703, VOG7298, VOG0181, VOG9655, VOG6495, VOG11003, VOG4829 |
| BLCLGBHF_60 | 4891 | 20947 | False | Siphoviridae | VOG0054, VOG0753, VOG4918, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4599, VOG4633, VOG6163, VOG0725, VOG0799, VOG0724, VOG9583, VOG4713, VOG1329 |
Phigaro v2.4.0 (Database: Jan. 2024 release)