Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MINOPLBK_10380717381421WalR2.93e-114transcriptional regulatory protein84.25100.00EPH95667
MINOPLBK_27531185531379CspR3.28e-29cold shock protein84.6198.48AAO82613
MINOPLBK_27531185531382CspA5.03e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
MINOPLBK_292191222815rep38904 / 90399.00CP005943
MINOPLBK_3620472550repUS54504 / 69082.14EU185047

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
MINOPLBK_10.01.00.0
MINOPLBK_21.00.01.0
MINOPLBK_31.00.01.0
MINOPLBK_40.01.00.0
MINOPLBK_51.00.01.0
MINOPLBK_71.00.01.0
MINOPLBK_81.00.01.0
MINOPLBK_100.01.00.0
MINOPLBK_110.01.00.0
MINOPLBK_121.00.01.0
MINOPLBK_131.00.01.0
MINOPLBK_141.00.01.0
MINOPLBK_161.00.01.0
MINOPLBK_171.00.01.0
MINOPLBK_180.01.00.0
MINOPLBK_190.01.00.0
MINOPLBK_201.00.01.0
MINOPLBK_210.01.00.0
MINOPLBK_220.01.00.0
MINOPLBK_230.01.00.0
MINOPLBK_240.01.00.0
MINOPLBK_251.00.01.0
MINOPLBK_270.01.00.0
MINOPLBK_281.00.01.0
MINOPLBK_291.00.01.0
MINOPLBK_301.00.01.0
MINOPLBK_310.01.00.0
MINOPLBK_321.00.01.0
MINOPLBK_331.00.01.0
MINOPLBK_350.01.00.0
MINOPLBK_361.00.01.0
MINOPLBK_380.01.00.0
MINOPLBK_391.00.01.0
MINOPLBK_401.00.01.0
MINOPLBK_411.00.01.0
MINOPLBK_421.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
MINOPLBK_27689935723864FalseSiphoviridaeVOG4615, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG0045, VOG0198, VOG4693, VOG4566, VOG0186, VOG1309, VOG7298, VOG0181, VOG9655, VOG6495
MINOPLBK_35659339685511FalseSiphoviridaeVOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0083, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG9671, VOG3643, VOG0044

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements