Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 2 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HAJLBJNA_87 | 9790 | 11205 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 95.20 | 100.00 | WP_011681165 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HAJLBJNA_92 | 49108 | 48404 | WalR | 1.00e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| HAJLBJNA_2 | 72599 | 72405 | CspR | 3.35e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| HAJLBJNA_2 | 72599 | 72402 | CspA | 5.13e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HAJLBJNA_139 | 854 | 1810 | repUS64 | 958 / 954 | 92.17 | JN601038 |
| HAJLBJNA_120 | 1965 | 2999 | rep38 | 1046 / 1104 | 82.50 | CP002655 |
| HAJLBJNA_109 | 4883 | 5845 | repUS73 | 979 / 1101 | 80.18 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HAJLBJNA_1 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_2 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_3 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_4 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_5 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_6 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_7 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_8 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_9 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_10 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_11 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_12 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_13 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_14 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_24 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_35 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_46 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_54 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_55 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_56 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_57 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_58 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_59 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_60 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_61 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_62 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_63 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_64 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_65 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_66 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_67 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_68 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_69 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_70 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_71 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_72 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_73 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_74 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_75 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_76 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_77 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_78 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_79 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_80 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_81 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_82 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_83 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_84 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_85 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_86 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_87 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_88 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_89 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_90 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_91 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_92 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_93 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_94 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_95 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_96 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_97 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_98 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_99 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_100 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_101 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_102 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_103 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_104 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_105 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_106 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_107 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_108 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_109 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_110 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_111 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_112 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_113 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_114 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_115 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_116 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_117 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_118 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_119 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_120 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_121 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_122 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_123 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_124 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_125 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_127 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_128 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_129 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_130 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_131 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_132 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_133 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_134 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_135 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_136 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_137 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_138 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_139 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_140 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_141 | 1.0 | 0.0 | 1.0 |
| HAJLBJNA_142 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_143 | 0.0 | 1.0 | 0.0 |
| HAJLBJNA_145 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HAJLBJNA_1 | 85566 | 106080 | False | Siphoviridae | VOG4632, VOG4609, VOG6414, VOG0205, VOG4581, VOG4544, VOG2935, VOG4556, VOG4568, VOG0204, VOG0198, VOG0275, VOG1347, VOG7508, VOG4602, VOG4052, VOG4602, VOG9667, VOG2786, VOG0181 |
| HAJLBJNA_1 | 113511 | 136356 | False | Siphoviridae | VOG0686, VOG0796, VOG10227, VOG0720, VOG4564, VOG10914, VOG1329, VOG4713, VOG0724, VOG0799, VOG0725, VOG4545, VOG6163, VOG4633, VOG4828, VOG4619, VOG4856, VOG0787, VOG0804, VOG4705, VOG10065, VOG4705, VOG4615 |
| HAJLBJNA_124 | 14063 | 40982 | False | Siphoviridae | VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG4570, VOG0044 |
Phigaro v2.4.0 (Database: Jan. 2024 release)