Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AHFNFGMN_3 | 171283 | 170579 | WalR | 2.68e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| AHFNFGMN_16 | 55823 | 55626 | CspR | 3.73e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AHFNFGMN_1 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_2 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_3 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_4 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_5 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_6 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_7 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_8 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_9 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_10 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_11 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_12 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_13 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_14 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_15 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_16 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_17 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_18 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_19 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_20 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_21 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_22 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_23 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_24 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_25 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_26 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_27 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_28 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_29 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_30 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_31 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_32 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_33 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_34 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_35 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_36 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_37 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_38 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_39 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_40 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_41 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_42 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_43 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_44 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_45 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_46 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_47 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_48 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_49 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_50 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_51 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_52 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_54 | 0.0 | 1.0 | 0.0 |
| AHFNFGMN_57 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_58 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_59 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_60 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_61 | 1.0 | 0.0 | 1.0 |
| AHFNFGMN_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AHFNFGMN_2 | 169919 | 209232 | False | Siphoviridae | VOG4649, VOG0054, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG11048, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG7540, VOG1886, VOG4581, VOG4841, VOG1345, VOG4549, VOG10904, VOG4570, VOG0198, VOG0044, VOG3643, VOG2820, VOG4567, VOG9741, VOG9759, VOG0327, VOG4606, VOG6545, VOG3777, VOG4548, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG4552, VOG4552, VOG9667 |
| AHFNFGMN_16 | 25 | 33147 | False | Siphoviridae | VOG4918, VOG0054, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG10904, VOG4570, VOG0198, VOG3643, VOG3643, VOG6131, VOG2820, VOG9759, VOG9741, VOG4693, VOG6623, VOG9860, VOG9667, VOG11003, VOG0226, VOG4566, VOG0186, VOG1309 |
| AHFNFGMN_20 | 993 | 10022 | False | Siphoviridae | VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204 |
| AHFNFGMN_24 | 27283 | 38288 | False | Unknown | VOG2406, VOG2070, VOG0275, VOG4585, VOG7537 |
Phigaro v2.4.0 (Database: Jan. 2024 release)