Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JHOKCHPN_1 | 37755 | 38459 | WalR | 2.68e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JHOKCHPN_35 | 44845 | 45039 | CspR | 4.02e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JHOKCHPN_35 | 44845 | 45042 | CspA | 6.17e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHOKCHPN_1 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_3 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_4 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_5 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_6 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_7 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_8 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_9 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_10 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_11 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_12 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_13 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_14 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_16 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_19 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_21 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_28 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_29 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_30 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_31 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_32 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_33 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_34 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_35 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_36 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_37 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_38 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_39 | 1.0 | 0.0 | 1.0 |
| JHOKCHPN_40 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_41 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_43 | 1.0 | 0.0 | 1.0 |
| JHOKCHPN_44 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_53 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_54 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_55 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_56 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_57 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_58 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_59 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_60 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_61 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_62 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_63 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_64 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_65 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_66 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_67 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_68 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_70 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_71 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_73 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_75 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_76 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_77 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_79 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_80 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_82 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_91 | 1.0 | 0.0 | 1.0 |
| JHOKCHPN_93 | 1.0 | 0.0 | 1.0 |
| JHOKCHPN_96 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_97 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_98 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_100 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_101 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_102 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_103 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_104 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_105 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_106 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_108 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_109 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_110 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_111 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_113 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_114 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_115 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_116 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_118 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_119 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_122 | 1.0 | 0.0 | 1.0 |
| JHOKCHPN_126 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_127 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_129 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_130 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_131 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_132 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_133 | 0.0 | 1.0 | 0.0 |
| JHOKCHPN_134 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)