Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MAABMJFE_3 | 171220 | 170516 | WalR | 2.80e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MAABMJFE_5 | 69863 | 69666 | CspR | 8.75e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MAABMJFE_1 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_2 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_3 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_4 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_5 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_6 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_7 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_8 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_9 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_10 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_11 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_12 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_13 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_14 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_15 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_16 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_17 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_18 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_19 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_20 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_21 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_22 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_23 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_24 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_25 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_26 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_27 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_28 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_29 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_30 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_31 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_32 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_33 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_34 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_35 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_36 | 1.0 | 0.0 | 1.0 |
| MAABMJFE_37 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_38 | 1.0 | 0.0 | 1.0 |
| MAABMJFE_39 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_40 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_41 | 1.0 | 0.0 | 1.0 |
| MAABMJFE_42 | 1.0 | 0.0 | 1.0 |
| MAABMJFE_43 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_44 | 0.0 | 1.0 | 0.0 |
| MAABMJFE_46 | 1.0 | 0.0 | 1.0 |
| MAABMJFE_48 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MAABMJFE_8 | 11303 | 21075 | False | Unknown | VOG7537, VOG4585, VOG0275, VOG2070 |
| MAABMJFE_8 | 131180 | 147162 | False | Siphoviridae | VOG0275, VOG6495, VOG8294, VOG0703, VOG0753, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586 |
| MAABMJFE_16 | 37460 | 48007 | False | Siphoviridae | VOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204 |
| MAABMJFE_22 | 3442 | 40873 | False | Siphoviridae | VOG7581, VOG6463, VOG4552, VOG3711, VOG3459, VOG0181, VOG10867, VOG4967, VOG3642, VOG0321, VOG0322, VOG0226, VOG4799, VOG0025, VOG7735, VOG4693, VOG4813, VOG9759, VOG2820, VOG3643, VOG3643, VOG0044, VOG0198, VOG4549, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG5601, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4605, VOG4599, VOG4705, VOG7888, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)