Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IOJBCPHG_3 | 107523 | 106819 | WalR | 1.62e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IOJBCPHG_21 | 19807 | 20004 | CspR | 2.64e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IOJBCPHG_1 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_2 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_3 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_4 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_5 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_6 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_7 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_8 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_9 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_10 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_11 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_12 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_13 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_14 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_15 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_16 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_17 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_18 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_19 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_20 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_21 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_22 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_23 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_24 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_25 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_26 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_27 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_28 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_29 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_30 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_31 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_32 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_33 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_34 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_35 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_36 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_37 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_38 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_39 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_40 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_41 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_42 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_43 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_44 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_45 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_46 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_47 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_48 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_49 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_50 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_51 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_52 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_53 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_54 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_55 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_56 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_57 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_58 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_59 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_60 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_61 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_62 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_63 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_64 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_65 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_66 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_67 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_68 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_69 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_70 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_71 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_72 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_73 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_74 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_75 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_76 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_77 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_78 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_79 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_80 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_81 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_82 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_83 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_84 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_85 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_86 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_87 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_88 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_89 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_90 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_91 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_92 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_93 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_94 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_95 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_96 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_97 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_99 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_100 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_101 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_103 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_104 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_105 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_106 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_108 | 0.0 | 1.0 | 0.0 |
| IOJBCPHG_109 | 1.0 | 0.0 | 1.0 |
| IOJBCPHG_110 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IOJBCPHG_9 | 37690 | 75364 | False | Siphoviridae | VOG3412, VOG8294, VOG0703, VOG1637, VOG4705, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG7540, VOG1886, VOG4581, VOG4841, VOG1345, VOG4549, VOG10904, VOG4570, VOG4694, VOG0198, VOG6414, VOG3643, VOG0152, VOG0195, VOG9759, VOG0327, VOG4606, VOG6545, VOG3777, VOG4548, VOG0322, VOG0321, VOG3642, VOG10867, VOG0181, VOG9748, VOG7236, VOG9667 |
| IOJBCPHG_15 | 35260 | 44615 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
| IOJBCPHG_21 | 42043 | 46598 | False | Unknown | VOG8241, VOG1309, VOG0186, VOG4566, VOG0226, VOG11003 |
| IOJBCPHG_29 | 6023 | 18468 | False | Siphoviridae | VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0221, VOG0274, VOG9280, VOG4841 |
| IOJBCPHG_38 | 17931 | 23863 | False | Unknown | VOG0275, VOG6495, VOG8294 |
| IOJBCPHG_42 | 1 | 20475 | False | Siphoviridae | VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1887, VOG3434, VOG4555, VOG5616, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG4570, VOG7136, VOG0198, VOG6815, VOG2820 |
Phigaro v2.4.0 (Database: Jan. 2024 release)