Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HCHGLJBI_19 | 50005 | 49301 | WalR | 6.83e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HCHGLJBI_33 | 17213 | 17410 | CspR | 1.47e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HCHGLJBI_1 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_2 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_3 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_4 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_5 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_6 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_7 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_8 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_9 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_10 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_11 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_12 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_13 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_14 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_15 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_16 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_17 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_18 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_19 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_20 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_21 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_22 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_23 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_24 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_25 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_26 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_27 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_28 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_29 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_30 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_31 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_32 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_33 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_34 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_35 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_36 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_37 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_38 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_39 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_40 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_41 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_42 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_43 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_44 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_45 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_46 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_47 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_48 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_49 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_50 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_51 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_52 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_53 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_54 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_55 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_56 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_57 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_58 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_59 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_60 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_61 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_62 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_63 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_64 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_65 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_66 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_67 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_68 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_69 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_70 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_71 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_72 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_73 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_74 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_75 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_76 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_77 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_78 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_79 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_80 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_81 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_82 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_83 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_84 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_85 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_86 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_87 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_88 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_89 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_90 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_91 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_92 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_93 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_94 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_95 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_96 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_97 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_98 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_99 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_100 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_101 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_102 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_103 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_104 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_105 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_107 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_108 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_109 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_110 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_111 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_112 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_113 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_114 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_115 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_116 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_117 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_118 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_119 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_120 | 0.0 | 1.0 | 0.0 |
| HCHGLJBI_121 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_122 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_123 | 1.0 | 0.0 | 1.0 |
| HCHGLJBI_125 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HCHGLJBI_7 | 1272 | 23823 | False | Siphoviridae | VOG10904, VOG4549, VOG1345, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0703, VOG4918, VOG0249 |
Phigaro v2.4.0 (Database: Jan. 2024 release)