Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 3 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IEGJPGEF_76 | 19909 | 19025 | OadB | 2.26e-135 | Na+ membrane pump | 81.36 | 81.72 | AAX97432 |
| IEGJPGEF_125 | 6481 | 5777 | WalR | 8.69e-114 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IEGJPGEF_141 | 5450 | 5647 | CspR | 1.13e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IEGJPGEF_1 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_3 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_4 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_5 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_6 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_8 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_10 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_11 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_12 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_14 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_15 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_16 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_17 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_18 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_19 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_20 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_21 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_22 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_23 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_24 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_25 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_26 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_27 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_28 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_30 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_31 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_32 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_33 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_34 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_35 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_36 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_37 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_38 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_39 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_40 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_41 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_42 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_43 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_44 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_45 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_47 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_48 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_49 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_50 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_51 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_52 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_53 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_54 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_55 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_56 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_57 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_58 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_59 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_60 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_61 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_62 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_63 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_64 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_65 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_66 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_67 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_68 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_69 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_70 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_71 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_72 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_73 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_74 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_76 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_77 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_78 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_79 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_80 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_82 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_83 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_84 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_85 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_86 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_87 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_88 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_89 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_90 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_91 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_92 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_93 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_94 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_96 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_97 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_98 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_99 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_100 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_101 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_102 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_104 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_105 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_106 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_107 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_108 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_110 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_112 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_113 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_114 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_115 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_116 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_117 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_118 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_119 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_121 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_122 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_123 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_124 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_125 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_126 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_127 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_128 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_129 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_130 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_131 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_132 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_133 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_134 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_135 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_136 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_137 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_138 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_139 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_140 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_141 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_142 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_143 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_144 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_145 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_146 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_147 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_148 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_149 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_150 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_151 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_152 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_153 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_154 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_156 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_157 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_158 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_159 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_160 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_161 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_162 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_163 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_164 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_165 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_166 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_167 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_168 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_169 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_170 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_171 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_172 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_174 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_175 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_176 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_177 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_178 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_179 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_180 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_181 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_182 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_183 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_184 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_185 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_186 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_187 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_188 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_189 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_190 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_191 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_192 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_193 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_196 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_197 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_198 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_199 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_200 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_201 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_202 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_203 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_204 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_205 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_206 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_207 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_208 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_209 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_210 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_211 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_212 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_213 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_214 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_215 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_216 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_217 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_218 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_220 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_221 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_222 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_223 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_224 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_225 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_226 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_227 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_228 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_229 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_230 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_231 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_232 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_234 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_235 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_236 | 0.0 | 1.0 | 0.0 |
| IEGJPGEF_238 | 1.0 | 0.0 | 1.0 |
| IEGJPGEF_239 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IEGJPGEF_147 | 36731 | 59282 | False | Siphoviridae | VOG0249, VOG4918, VOG0703, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG4945, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG7540, VOG1886, VOG4581, VOG4841, VOG1345, VOG4549 |
Phigaro v2.4.0 (Database: Jan. 2024 release)