Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JIBHCKEE_9 | 66691 | 65987 | WalR | 1.37e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JIBHCKEE_11 | 12871 | 13068 | CspR | 4.72e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JIBHCKEE_1 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_2 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_3 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_4 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_5 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_6 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_7 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_8 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_9 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_10 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_11 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_12 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_13 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_14 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_15 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_16 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_17 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_18 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_19 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_20 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_21 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_22 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_23 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_24 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_25 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_26 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_27 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_28 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_29 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_30 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_31 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_32 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_33 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_34 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_35 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_36 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_37 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_38 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_39 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_40 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_41 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_42 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_43 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_44 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_45 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_46 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_47 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_48 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_49 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_50 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_51 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_52 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_53 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_54 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_55 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_56 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_57 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_58 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_59 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_60 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_61 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_62 | 0.0 | 1.0 | 0.0 |
| JIBHCKEE_64 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_65 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_66 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_67 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_68 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_69 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_71 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_72 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_73 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_74 | 1.0 | 0.0 | 1.0 |
| JIBHCKEE_75 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JIBHCKEE_22 | 21272 | 32106 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)