Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OIGACJCJ_3 | 90845 | 90141 | WalR | 2.30e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OIGACJCJ_1 | 50046 | 49849 | CspR | 1.31e-32 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OIGACJCJ_38 | 14604 | 15662 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OIGACJCJ_1 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_2 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_3 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_4 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_5 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_6 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_7 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_8 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_9 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_10 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_11 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_12 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_13 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_14 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_15 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_16 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_17 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_18 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_19 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_20 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_21 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_22 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_23 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_24 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_25 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_26 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_27 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_28 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_29 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_30 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_31 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_32 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_33 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_34 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_35 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_36 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_37 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_38 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_39 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_40 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_41 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_42 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_43 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_44 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_45 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_46 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_47 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_48 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_49 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_50 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_51 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_52 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_53 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_54 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_55 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_56 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_57 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_58 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_59 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_60 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_61 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_62 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_63 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_64 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_65 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_66 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_67 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_69 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_70 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_71 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_72 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_73 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_74 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_76 | 0.0 | 1.0 | 0.0 |
| OIGACJCJ_77 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_78 | 1.0 | 0.0 | 1.0 |
| OIGACJCJ_79 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OIGACJCJ_1 | 964 | 28145 | False | Siphoviridae | VOG4705, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4711, VOG4555, VOG1183, VOG1300, VOG5616, VOG0692, VOG0691, VOG4544, VOG0796, VOG4570, VOG4694, VOG7136, VOG0198, VOG5353, VOG0102, VOG3643, VOG0195, VOG9741, VOG0536, VOG9860, VOG0189, VOG4566, VOG0186, VOG1309 |
| OIGACJCJ_1 | 118691 | 128938 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632 |
| OIGACJCJ_19 | 11491 | 23652 | False | Siphoviridae | VOG6142, VOG4694, VOG11003, VOG1638, VOG6238, VOG4566, VOG1292, VOG0083, VOG0083, VOG0650, VOG3549, VOG9667, VOG0862, VOG9312 |
| OIGACJCJ_37 | 2 | 21173 | False | Siphoviridae | VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG8134, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG4570, VOG10481, VOG0143 |
Phigaro v2.4.0 (Database: Jan. 2024 release)