Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IMNPBNDH_10 | 33418 | 34122 | WalR | 1.36e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IMNPBNDH_2 | 18949 | 19146 | CspR | 9.44e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMNPBNDH_1 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_2 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_3 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_4 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_5 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_6 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_7 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_8 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_9 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_10 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_11 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_12 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_13 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_14 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_15 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_16 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_17 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_18 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_19 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_20 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_21 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_22 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_23 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_24 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_25 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_26 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_27 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_28 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_29 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_30 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_31 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_32 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_33 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_34 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_35 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_36 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_37 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_38 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_39 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_40 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_41 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_42 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_43 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_44 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_45 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_46 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_47 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_48 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_49 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_50 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_51 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_52 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_53 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_54 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_55 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_56 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_57 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_58 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_59 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_60 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_62 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_63 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_64 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_66 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_67 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_68 | 0.0 | 1.0 | 0.0 |
| IMNPBNDH_69 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_70 | 1.0 | 0.0 | 1.0 |
| IMNPBNDH_71 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IMNPBNDH_2 | 41522 | 75111 | False | Siphoviridae | VOG1309, VOG0186, VOG4566, VOG0226, VOG11003, VOG9667, VOG9860, VOG6623, VOG4693, VOG9741, VOG9759, VOG2820, VOG6131, VOG3643, VOG3643, VOG0198, VOG4570, VOG10904, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4918 |
| IMNPBNDH_6 | 2655 | 25059 | False | Siphoviridae | VOG1886, VOG0202, VOG4556, VOG4568, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG0753, VOG0703, VOG8294, VOG6495 |
Phigaro v2.4.0 (Database: Jan. 2024 release)