Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AOGAALNK_75 | 33219 | 33923 | WalR | 2.51e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| AOGAALNK_32 | 23206 | 23403 | CspR | 3.71e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AOGAALNK_4 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_5 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_6 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_7 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_8 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_9 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_10 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_11 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_12 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_13 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_14 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_16 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_17 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_18 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_19 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_20 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_21 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_22 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_24 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_25 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_26 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_27 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_28 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_29 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_30 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_31 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_32 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_33 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_34 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_35 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_36 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_38 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_39 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_40 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_42 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_43 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_44 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_45 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_46 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_47 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_48 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_49 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_50 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_51 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_52 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_53 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_54 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_55 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_56 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_57 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_58 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_59 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_60 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_62 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_63 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_64 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_65 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_66 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_67 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_70 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_72 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_73 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_75 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_77 | 1.0 | 0.0 | 1.0 |
| AOGAALNK_79 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_82 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_83 | 0.0 | 1.0 | 0.0 |
| AOGAALNK_86 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AOGAALNK_46 | 3 | 31313 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG4549, VOG10904, VOG4570, VOG3691, VOG0198, VOG3643, VOG0152, VOG0195, VOG6238, VOG4693, VOG6623, VOG0189, VOG4566, VOG0226, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG3622 |
Phigaro v2.4.0 (Database: Jan. 2024 release)