Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CIEBMNNF_78 | 8802 | 8608 | CspA | 6.36e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CIEBMNNF_1 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_2 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_3 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_5 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_6 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_8 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_9 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_10 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_12 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_13 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_14 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_15 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_16 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_17 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_18 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_19 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_20 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_21 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_22 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_23 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_24 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_27 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_35 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_46 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_57 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_64 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_65 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_66 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_67 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_68 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_69 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_70 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_71 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_72 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_73 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_74 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_76 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_77 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_78 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_79 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_80 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_81 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_82 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_83 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_84 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_85 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_86 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_87 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_88 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_89 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_90 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_91 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_92 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_93 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_94 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_95 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_96 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_97 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_98 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_99 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_100 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_101 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_103 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_104 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_105 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_106 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_107 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_108 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_109 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_110 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_111 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_112 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_113 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_114 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_115 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_116 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_117 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_118 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_119 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_120 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_121 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_122 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_123 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_124 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_125 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_126 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_127 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_129 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_130 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_131 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_132 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_133 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_134 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_135 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_136 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_137 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_138 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_139 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_140 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_142 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_143 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_144 | 1.0 | 0.0 | 1.0 |
| CIEBMNNF_145 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_146 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_147 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_148 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_149 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_150 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_152 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_153 | 0.0 | 1.0 | 0.0 |
| CIEBMNNF_154 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CIEBMNNF_64 | 4764 | 28102 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG9813, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG1345, VOG4972 |
| CIEBMNNF_68 | 21120 | 27907 | False | Myoviridae / Siphoviridae | VOG0414, VOG4552, VOG0694, VOG9667, VOG0535, VOG0283, VOG0514, VOG0226, VOG4566, VOG0189 |
| CIEBMNNF_68 | 32687 | 58751 | False | Myoviridae | VOG0198, VOG4972, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG4711, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG10263, VOG6298, VOG3298, VOG8917, VOG9888, VOG0703 |
| CIEBMNNF_103 | 41531 | 43681 | False | Unknown | VOG0275 |
| CIEBMNNF_105 | 646 | 23462 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG4552, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG3463, VOG8438, VOG4334, VOG4705, VOG0641 |
Phigaro v2.4.0 (Database: Jan. 2024 release)