Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AOJNJLBO_518 | 8685 | 8491 | CspA | 6.21e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
| AOJNJLBO_318 | 597 | 1 | ctaB | 5.90e-120 | protoheme IX farnesyltransferase | 86.94 | 65.68 | AHM68781 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AOJNJLBO_506 | 5226 | 6256 | repUS67 | 1038 / 1039 | 87.67 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AOJNJLBO_1 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_2 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_3 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_4 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_7 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_8 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_9 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_10 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_11 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_12 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_13 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_14 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_15 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_16 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_17 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_18 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_19 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_20 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_23 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_24 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_25 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_26 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_27 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_28 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_29 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_30 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_32 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_35 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_36 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_37 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_38 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_39 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_40 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_41 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_42 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_43 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_44 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_45 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_46 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_48 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_49 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_50 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_51 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_52 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_53 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_54 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_55 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_57 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_63 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_65 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_66 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_68 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_69 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_70 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_71 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_77 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_79 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_80 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_81 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_83 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_85 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_88 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_90 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_92 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_95 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_97 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_101 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_109 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_112 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_113 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_120 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_123 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_124 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_125 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_126 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_131 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_135 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_137 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_146 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_150 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_156 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_158 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_167 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_171 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_174 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_178 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_183 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_187 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_188 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_189 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_198 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_200 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_202 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_205 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_211 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_222 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_223 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_234 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_240 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_245 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_256 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_257 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_267 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_278 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_284 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_289 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_291 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_300 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_311 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_316 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_321 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_322 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_328 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_333 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_334 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_345 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_356 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_360 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_372 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_377 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_383 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_388 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_391 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_398 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_399 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_410 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_411 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_415 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_421 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_432 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_443 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_444 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_455 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_458 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_473 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_474 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_475 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_476 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_477 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_478 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_479 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_480 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_481 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_482 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_483 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_484 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_485 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_486 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_488 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_489 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_490 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_491 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_496 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_497 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_498 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_499 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_500 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_502 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_503 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_504 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_505 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_506 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_507 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_508 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_509 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_510 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_511 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_512 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_513 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_514 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_515 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_517 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_518 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_519 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_520 | 0.0 | 1.0 | 0.0 |
| AOJNJLBO_521 | 1.0 | 0.0 | 1.0 |
| AOJNJLBO_522 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AOJNJLBO_245 | 19533 | 24438 | False | Unknown | VOG9667, VOG0862, VOG0275, VOG8910 |
| AOJNJLBO_256 | 4681 | 27826 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG9813, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG1345, VOG4972 |
| AOJNJLBO_300 | 46068 | 72132 | False | Myoviridae | VOG8294, VOG0703, VOG9888, VOG8917, VOG3298, VOG6298, VOG10263, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG4972, VOG0198 |
| AOJNJLBO_300 | 76912 | 83695 | False | Siphoviridae | VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0535, VOG9667, VOG0694, VOG4552 |
| AOJNJLBO_444 | 42454 | 64747 | False | Siphoviridae | VOG0703, VOG0641, VOG4705, VOG4334, VOG8438, VOG3463, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG4552, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581 |
| AOJNJLBO_506 | 13155 | 16289 | False | Unknown | VOG6031, VOG6524 |
Phigaro v2.4.0 (Database: Jan. 2024 release)