Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDMNABPL_165 | 2065 | 2259 | CspA | 6.31e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FDMNABPL_1 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_2 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_3 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_4 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_5 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_8 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_9 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_10 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_11 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_12 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_13 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_14 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_16 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_18 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_20 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_21 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_22 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_23 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_24 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_25 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_26 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_30 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_31 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_32 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_34 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_35 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_37 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_44 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_45 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_56 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_66 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_76 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_87 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_98 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_100 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_101 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_102 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_103 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_104 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_105 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_106 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_107 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_108 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_109 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_110 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_111 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_112 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_113 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_114 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_115 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_116 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_117 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_118 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_119 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_120 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_121 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_122 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_123 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_124 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_125 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_126 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_127 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_128 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_129 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_130 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_131 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_132 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_133 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_134 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_135 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_138 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_139 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_140 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_141 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_142 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_143 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_144 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_145 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_146 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_147 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_148 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_149 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_150 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_151 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_152 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_153 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_154 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_155 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_156 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_157 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_158 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_159 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_160 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_161 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_162 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_164 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_165 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_166 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_167 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_168 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_169 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_170 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_171 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_172 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_173 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_174 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_176 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_177 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_178 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_179 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_180 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_181 | 0.0 | 1.0 | 0.0 |
| FDMNABPL_184 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_185 | 1.0 | 0.0 | 1.0 |
| FDMNABPL_186 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FDMNABPL_2 | 46311 | 72375 | False | Myoviridae | VOG8294, VOG0703, VOG9888, VOG8917, VOG3298, VOG6298, VOG10263, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG4972, VOG0198 |
| FDMNABPL_2 | 77155 | 83942 | False | Siphoviridae | VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0535, VOG9667, VOG0694, VOG4552 |
| FDMNABPL_129 | 4763 | 28101 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG9813, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG1345, VOG4972 |
| FDMNABPL_129 | 38276 | 42832 | False | Podoviridae | VOG9667, VOG8520, VOG0862, VOG6140, VOG0774, VOG2350 |
| FDMNABPL_131 | 26835 | 28985 | False | Unknown | VOG0862, VOG0275 |
| FDMNABPL_134 | 42301 | 64594 | False | Siphoviridae | VOG0703, VOG0641, VOG4705, VOG4334, VOG8438, VOG3463, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG4552, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1345, VOG4544, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)