Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CIOOLDEI_25 | 4743 | 4549 | CspA | 1.28e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CIOOLDEI_1 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_2 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_3 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_4 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_5 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_6 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_7 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_8 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_9 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_10 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_11 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_12 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_13 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_14 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_15 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_16 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_17 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_18 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_19 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_20 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_21 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_22 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_24 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_25 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_26 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_27 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_28 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_29 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_30 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_31 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_32 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_33 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_34 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_35 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_36 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_37 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_38 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_39 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_40 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_41 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_42 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_43 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_44 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_45 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_46 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_47 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_48 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_49 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_50 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_51 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_52 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_53 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_54 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_55 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_56 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_57 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_58 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_59 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_60 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_61 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_62 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_63 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_64 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_66 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_67 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_68 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_69 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_70 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_71 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_72 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_73 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_74 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_75 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_77 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_78 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_79 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_80 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_86 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_87 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_88 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_89 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_90 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_91 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_92 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_93 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_94 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_95 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_96 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_97 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_98 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_99 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_100 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_101 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_102 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_103 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_104 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_105 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_106 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_107 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_108 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_109 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_110 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_111 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_112 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_113 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_114 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_115 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_116 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_117 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_118 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_119 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_120 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_121 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_122 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_123 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_124 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_125 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_126 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_127 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_128 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_129 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_130 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_131 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_132 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_133 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_134 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_135 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_136 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_137 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_138 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_139 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_140 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_141 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_142 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_143 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_144 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_145 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_146 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_147 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_148 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_149 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_150 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_151 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_152 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_153 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_154 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_155 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_156 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_157 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_158 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_159 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_160 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_161 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_162 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_163 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_164 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_165 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_166 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_167 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_168 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_169 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_170 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_171 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_172 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_173 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_174 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_175 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_176 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_177 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_179 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_180 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_181 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_182 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_183 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_185 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_186 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_188 | 0.0 | 1.0 | 0.0 |
| CIOOLDEI_191 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_197 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_198 | 1.0 | 0.0 | 1.0 |
| CIOOLDEI_199 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CIOOLDEI_98 | 28472 | 38380 | False | Myoviridae | VOG0083, VOG0382, VOG0384, VOG10104, VOG0226, VOG6085, VOG6431 |
| CIOOLDEI_139 | 7692 | 17121 | False | Siphoviridae | VOG4714, VOG0204, VOG0198, VOG4568, VOG4556, VOG4556, VOG4544, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)