Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IPGMOBAH_13 | 9848 | 9147 | WalR | 9.37e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IPGMOBAH_1 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_2 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_3 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_4 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_5 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_6 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_7 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_8 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_9 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_10 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_11 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_12 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_13 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_14 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_15 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_16 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_17 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_18 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_19 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_20 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_21 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_24 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_26 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_31 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_35 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_41 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_42 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_43 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_44 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_45 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_46 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_47 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_48 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_49 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_50 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_51 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_52 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_53 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_54 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_55 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_56 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_57 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_58 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_59 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_60 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_61 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_62 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_63 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_64 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_65 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_66 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_67 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_68 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_69 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_70 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_71 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_72 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_73 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_74 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_75 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_76 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_77 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_78 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_79 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_80 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_81 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_82 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_83 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_84 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_85 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_86 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_87 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_88 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_89 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_90 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_91 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_92 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_93 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_94 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_95 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_96 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_97 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_98 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_99 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_100 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_101 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_102 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_103 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_104 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_105 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_106 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_107 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_108 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_109 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_110 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_111 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_112 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_113 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_114 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_115 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_116 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_117 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_118 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_119 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_120 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_121 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_122 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_123 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_124 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_125 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_126 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_127 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_128 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_129 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_130 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_131 | 1.0 | 0.0 | 1.0 |
| IPGMOBAH_132 | 0.0 | 1.0 | 0.0 |
| IPGMOBAH_133 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IPGMOBAH_46 | 5303 | 39313 | False | Myoviridae | VOG3537, VOG6495, VOG0464, VOG0283, VOG0226, VOG0514, VOG4566, VOG0189, VOG0052, VOG0044, VOG9667, VOG0198, VOG0638, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG1353, VOG1883, VOG1352, VOG4699, VOG1026, VOG5904, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG4612 |
Phigaro v2.4.0 (Database: Jan. 2024 release)