Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OHPJBILC_34 | 101748 | 101149 | WalR | 2.67e-92 | transcriptional regulatory protein | 81.00 | 85.04 | EPH95667 |
| OHPJBILC_9 | 182 | 379 | CspR | 2.95e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OHPJBILC_1 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_2 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_3 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_4 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_5 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_6 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_7 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_8 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_9 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_10 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_11 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_12 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_13 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_14 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_15 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_16 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_17 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_18 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_19 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_20 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_21 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_23 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_27 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_28 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_29 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_30 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_31 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_32 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_33 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_34 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_35 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_36 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_37 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_38 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_39 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_40 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_41 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_42 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_43 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_44 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_45 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_46 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_47 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_48 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_49 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_50 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_51 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_52 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_53 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_54 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_55 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_56 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_57 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_58 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_59 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_60 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_61 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_62 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_63 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_65 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_66 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_67 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_68 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_69 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_70 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_71 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_72 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_73 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_75 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_76 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_77 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_78 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_79 | 0.0 | 1.0 | 0.0 |
| OHPJBILC_80 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_81 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_82 | 1.0 | 0.0 | 1.0 |
| OHPJBILC_83 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OHPJBILC_9 | 21546 | 53495 | False | Siphoviridae | VOG8241, VOG1309, VOG0186, VOG4566, VOG0226, VOG11003, VOG9667, VOG9860, VOG0536, VOG0195, VOG0275, VOG4643, VOG2820, VOG6815, VOG0198, VOG7136, VOG4570, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG5616, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605 |
| OHPJBILC_46 | 3575 | 17889 | False | Siphoviridae | VOG1345, VOG4841, VOG4581, VOG1886, VOG4556, VOG4573, VOG4553, VOG9975, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660 |
Phigaro v2.4.0 (Database: Jan. 2024 release)