Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ADHOPJBF_87 | 25544 | 25350 | CspA | 9.16e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ADHOPJBF_1 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_2 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_3 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_4 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_5 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_6 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_7 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_8 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_9 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_10 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_11 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_12 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_13 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_14 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_15 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_16 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_17 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_18 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_19 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_20 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_21 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_22 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_23 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_24 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_25 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_26 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_27 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_28 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_29 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_30 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_31 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_32 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_33 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_34 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_35 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_36 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_37 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_38 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_39 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_40 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_41 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_42 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_43 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_44 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_45 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_46 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_47 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_48 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_49 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_50 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_51 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_52 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_53 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_54 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_55 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_56 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_57 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_58 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_59 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_60 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_61 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_62 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_63 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_64 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_65 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_66 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_67 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_68 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_69 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_70 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_71 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_72 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_73 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_74 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_75 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_76 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_77 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_78 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_79 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_80 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_81 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_82 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_83 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_84 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_85 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_86 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_87 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_88 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_89 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_90 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_91 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_92 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_93 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_94 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_95 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_96 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_97 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_98 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_99 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_100 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_101 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_102 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_103 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_104 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_105 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_106 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_107 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_108 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_109 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_110 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_111 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_112 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_113 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_114 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_115 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_116 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_117 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_118 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_119 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_120 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_121 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_122 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_123 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_124 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_125 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_126 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_127 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_128 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_129 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_130 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_131 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_132 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_133 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_134 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_135 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_136 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_137 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_138 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_139 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_140 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_141 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_142 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_143 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_144 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_145 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_146 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_147 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_148 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_149 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_150 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_151 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_152 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_153 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_154 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_155 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_156 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_157 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_158 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_159 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_160 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_161 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_163 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_164 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_165 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_166 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_167 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_168 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_169 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_170 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_173 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_174 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_175 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_176 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_177 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_178 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_179 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_180 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_181 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_182 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_183 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_184 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_187 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_188 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_190 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_191 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_192 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_194 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_195 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_196 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_197 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_198 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_199 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_200 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_201 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_202 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_203 | 0.0 | 1.0 | 0.0 |
| ADHOPJBF_204 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_205 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_206 | 1.0 | 0.0 | 1.0 |
| ADHOPJBF_207 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ADHOPJBF_55 | 1786 | 15417 | False | Unknown | VOG1334, VOG4545, VOG1335, VOG10608, VOG9888, VOG0648 |
| ADHOPJBF_123 | 2324 | 39211 | True | Siphoviridae | VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502, VOG9409, VOG0221, VOG0221, VOG7347, VOG3594, VOG4548, VOG4970, VOG9874, VOG11003, VOG0083, VOG0052, VOG7438, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581 |
| ADHOPJBF_129 | 8833 | 30743 | False | Unknown | VOG5722, VOG4544, VOG5461, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG6036, VOG7629, VOG7628, VOG5534, VOG6540, VOG10609, VOG9226, VOG0648, VOG0753 |
Phigaro v2.4.0 (Database: Jan. 2024 release)