Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ILIIHHMJ_7 | 53541 | 52837 | WalR | 8.59e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| ILIIHHMJ_25 | 13533 | 13336 | CspR | 2.46e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ILIIHHMJ_1 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_2 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_3 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_4 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_5 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_6 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_7 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_8 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_9 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_10 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_11 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_12 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_13 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_14 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_15 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_16 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_17 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_18 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_19 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_20 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_21 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_22 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_23 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_24 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_25 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_26 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_27 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_28 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_29 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_30 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_31 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_32 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_33 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_34 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_35 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_36 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_37 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_38 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_39 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_40 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_41 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_42 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_43 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_44 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_45 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_46 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_47 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_48 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_49 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_50 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_51 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_52 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_53 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_54 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_55 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_56 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_58 | 0.0 | 1.0 | 0.0 |
| ILIIHHMJ_59 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_60 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_61 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_62 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_63 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_64 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_65 | 1.0 | 0.0 | 1.0 |
| ILIIHHMJ_66 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ILIIHHMJ_21 | 1994 | 23531 | False | Siphoviridae | VOG3699, VOG4544, VOG0720, VOG4564, VOG1300, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4545, VOG4605, VOG4599, VOG0861, VOG7017, VOG0703 |
Phigaro v2.4.0 (Database: Jan. 2024 release)