Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ACACDJDG_57 | 26339 | 27046 | WalR | 1.34e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| ACACDJDG_87 | 76554 | 76357 | CspR | 1.89e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| ACACDJDG_87 | 76554 | 76360 | CspA | 9.20e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACACDJDG_1 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_2 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_4 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_6 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_7 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_11 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_13 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_15 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_21 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_24 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_35 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_40 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_41 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_42 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_43 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_45 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_46 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_47 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_48 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_49 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_50 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_51 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_52 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_53 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_54 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_55 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_56 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_57 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_58 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_59 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_60 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_61 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_62 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_63 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_64 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_65 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_66 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_67 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_70 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_71 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_72 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_73 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_74 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_75 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_76 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_77 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_78 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_79 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_80 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_81 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_82 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_83 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_84 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_85 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_86 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_87 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_88 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_89 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_90 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_91 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_92 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_93 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_94 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_95 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_96 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_99 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_100 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_101 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_105 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_106 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_108 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_109 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_111 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_112 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_114 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_115 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_116 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_117 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_118 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_119 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_120 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_123 | 0.0 | 1.0 | 0.0 |
| ACACDJDG_126 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_127 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_128 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_129 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_130 | 1.0 | 0.0 | 1.0 |
| ACACDJDG_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACACDJDG_45 | 3672 | 18025 | False | Siphoviridae | VOG8681, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG1125, VOG9629, VOG9258 |
| ACACDJDG_129 | 4692 | 13984 | False | Siphoviridae | VOG8681, VOG3699, VOG4544, VOG0691, VOG0692, VOG4555, VOG0695, VOG0696, VOG0697, VOG0698 |
Phigaro v2.4.0 (Database: Jan. 2024 release)