Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BLPFPFGI_53 | 52616 | 53320 | WalR | 4.55e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BLPFPFGI_63 | 3909 | 4106 | CspR | 7.40e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BLPFPFGI_64 | 21232 | 22293 | repUS74 | 1064 / 1062 | 91.64 | CP000424 |
| BLPFPFGI_94 | 26605 | 27644 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BLPFPFGI_1 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_2 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_3 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_4 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_9 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_11 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_14 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_15 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_18 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_19 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_20 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_21 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_22 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_24 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_27 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_31 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_32 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_33 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_34 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_35 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_36 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_37 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_38 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_39 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_40 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_41 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_42 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_43 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_44 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_45 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_46 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_47 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_48 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_49 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_50 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_51 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_52 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_53 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_54 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_55 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_56 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_58 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_59 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_60 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_61 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_62 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_63 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_64 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_65 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_66 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_67 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_68 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_69 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_70 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_71 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_72 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_73 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_74 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_75 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_76 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_77 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_78 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_79 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_80 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_81 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_82 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_83 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_84 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_85 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_86 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_87 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_88 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_90 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_91 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_92 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_93 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_94 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_95 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_96 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_97 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_99 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_102 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_104 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_105 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_106 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_107 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_108 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_109 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_110 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_112 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_113 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_114 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_116 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_117 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_118 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_119 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_120 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_124 | 1.0 | 0.0 | 1.0 |
| BLPFPFGI_126 | 0.0 | 1.0 | 0.0 |
| BLPFPFGI_127 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BLPFPFGI_50 | 482581 | 509497 | False | Siphoviridae | VOG1292, VOG0275, VOG6495, VOG8294, VOG0703, VOG0753, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG1886, VOG4581, VOG0195 |
| BLPFPFGI_63 | 26147 | 51771 | False | Siphoviridae | VOG1309, VOG0186, VOG4566, VOG0189, VOG9860, VOG6623, VOG4693, VOG0152, VOG3643, VOG3643, VOG0044, VOG0198, VOG4570, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545 |
Phigaro v2.4.0 (Database: Jan. 2024 release)