Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KGBONIIF_61 | 3317 | 4087 | ANT(4')-Ia | ARO:3002623 | ANT(4')-Ia | 99.60 | 101.19 | K02551.1 |
| KGBONIIF_61 | 2123 | 2608 | lnuA | ARO:3002835 | lnuA | 96.89 | 100.00 | M14039.1 |
| KGBONIIF_61 | 1009 | 1809 | ANT(9)-Ia | ARO:3002630 | ANT(9)-Ia | 99.23 | 102.31 | X02588.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KGBONIIF_61 | 1009 | 1777 | ant(9)-Ia | Spectinomycin | 100.00 | 98.21 | X02588 |
| KGBONIIF_61 | 3317 | 4078 | aadD | Amikacin, Tobramycin | 99.87 | 100.00 | M19465 |
| KGBONIIF_61 | 2123 | 2608 | lnu(A) | Lincomycin | 98.35 | 100.00 | M14039 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KGBONIIF_61 | 3320 | 4087 | aadD1 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ia | EXACTX | 100.00 | 100.00 | WP_032488330.1 |
| KGBONIIF_61 | 2126 | 2608 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | BLASTX | 99.38 | 100.00 | WP_001829870.1 |
| KGBONIIF_61 | 1009 | 1785 | ant(9)-Ia | aminoglycoside nucleotidyltransferase ANT(9)-Ia | BLASTX | 99.23 | 99.62 | WP_000067268.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KGBONIIF_101 | 20064 | 19870 | CspA | 8.97e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KGBONIIF_1 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_2 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_3 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_4 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_5 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_6 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_7 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_8 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_9 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_10 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_11 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_12 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_13 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_14 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_15 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_16 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_17 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_18 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_20 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_21 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_22 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_23 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_24 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_25 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_26 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_27 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_28 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_29 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_30 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_31 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_32 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_33 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_34 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_35 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_36 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_37 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_38 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_39 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_40 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_44 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_51 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_52 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_53 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_54 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_55 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_56 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_57 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_58 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_59 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_60 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_61 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_62 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_63 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_64 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_65 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_66 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_67 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_68 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_69 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_70 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_71 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_72 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_73 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_74 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_75 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_76 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_77 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_78 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_79 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_80 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_81 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_82 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_83 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_84 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_85 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_86 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_87 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_88 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_89 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_90 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_91 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_92 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_93 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_94 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_95 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_96 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_97 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_98 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_99 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_100 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_101 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_102 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_103 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_104 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_105 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_106 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_107 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_108 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_109 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_110 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_111 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_112 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_113 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_114 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_115 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_116 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_117 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_118 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_119 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_120 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_121 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_122 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_123 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_124 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_125 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_126 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_127 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_128 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_129 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_130 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_131 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_132 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_133 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_134 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_135 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_136 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_137 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_138 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_139 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_141 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_142 | 0.0 | 1.0 | 0.0 |
| KGBONIIF_143 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_144 | 1.0 | 0.0 | 1.0 |
| KGBONIIF_145 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KGBONIIF_57 | 37812 | 61009 | False | Siphoviridae | VOG0054, VOG0753, VOG0648, VOG9226, VOG10609, VOG4783, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG6246, VOG6524, VOG6031, VOG5721, VOG5461, VOG4544, VOG5722 |
| KGBONIIF_66 | 3385 | 13947 | False | Siphoviridae | VOG7429, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)