Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DDBKIOAA_102 | 4297 | 6222 | tet(W) | ARO:3000194 | tet(W) | 96.55 | 100.31 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DDBKIOAA_97 | 2004 | 2870 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| DDBKIOAA_102 | 4297 | 6209 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.85 | 99.64 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DDBKIOAA_97 | 2007 | 2870 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| DDBKIOAA_102 | 4297 | 6210 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 99.84 | WP_003672618.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DDBKIOAA_94 | 42101 | 42295 | CspA | 9.77e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DDBKIOAA_1 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_2 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_4 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_5 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_6 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_7 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_8 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_9 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_10 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_11 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_12 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_13 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_14 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_15 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_16 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_17 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_18 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_19 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_20 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_21 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_22 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_23 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_24 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_33 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_44 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_55 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_56 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_57 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_58 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_59 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_60 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_61 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_62 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_63 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_64 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_65 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_66 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_67 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_68 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_69 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_70 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_71 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_72 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_73 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_74 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_75 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_76 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_77 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_78 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_79 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_80 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_81 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_82 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_83 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_84 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_85 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_86 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_87 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_88 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_89 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_90 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_91 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_92 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_93 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_94 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_95 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_96 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_97 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_98 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_99 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_100 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_101 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_102 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_103 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_104 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_105 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_106 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_107 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_108 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_109 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_110 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_111 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_112 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_113 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_114 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_115 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_116 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_117 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_118 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_119 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_120 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_121 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_122 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_123 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_124 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_125 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_126 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_127 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_128 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_129 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_130 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_131 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_132 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_133 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_134 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_135 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_136 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_137 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_138 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_139 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_140 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_141 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_142 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_143 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_144 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_145 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_146 | 1.0 | 0.0 | 1.0 |
| DDBKIOAA_147 | 0.0 | 1.0 | 0.0 |
| DDBKIOAA_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DDBKIOAA_57 | 7291 | 37518 | False | Siphoviridae | VOG0321, VOG8222, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG1183, VOG7043, VOG3307, VOG0198, VOG0796, VOG10904, VOG10227, VOG0720, VOG4564, VOG7533, VOG4555, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG4910, VOG1927, VOG4660, VOG0641 |
| DDBKIOAA_61 | 59766 | 66631 | False | Siphoviridae | VOG0275, VOG4775, VOG6422, VOG0682, VOG0047, VOG3557, VOG4602, VOG9667, VOG9667 |
| DDBKIOAA_61 | 79623 | 105888 | False | Siphoviridae | VOG0689, VOG9503, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4713, VOG1330, VOG1900, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG9888, VOG0648, VOG0641 |
| DDBKIOAA_73 | 5306 | 8690 | False | Unknown | VOG9667, VOG0275 |
| DDBKIOAA_105 | 4575 | 23290 | False | Siphoviridae | VOG3462, VOG0801, VOG8263, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG0866, VOG9312, VOG4581, VOG4841, VOG0866 |
Phigaro v2.4.0 (Database: Jan. 2024 release)