Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLJAOKGB_136 | 1392 | 1877 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
| DLJAOKGB_114 | 8068 | 9294 | tet(W) | ARO:3000194 | tet(W) | 96.01 | 63.85 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DLJAOKGB_131 | 4031 | 4897 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| DLJAOKGB_136 | 1392 | 1877 | lnu(A) | Lincomycin | 98.97 | 100.00 | M14039 |
| DLJAOKGB_114 | 8093 | 9295 | tet(O/W) | Doxycycline, Tetracycline, Minocycline | 99.50 | 62.66 | AM889121 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLJAOKGB_131 | 4031 | 4894 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| DLJAOKGB_136 | 1395 | 1877 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| DLJAOKGB_114 | 8092 | 9294 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | PARTIAL_CONTIG_ENDX | 99.50 | 62.75 | WP_003672618.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DLJAOKGB_138 | 41916 | 42110 | CspA | 6.94e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DLJAOKGB_1 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_2 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_3 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_4 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_5 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_6 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_7 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_8 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_9 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_10 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_11 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_12 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_13 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_14 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_15 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_16 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_17 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_19 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_20 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_21 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_22 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_23 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_24 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_25 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_26 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_27 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_28 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_30 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_31 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_32 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_33 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_34 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_35 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_36 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_37 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_38 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_39 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_40 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_41 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_42 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_43 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_44 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_45 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_46 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_55 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_56 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_57 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_58 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_59 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_60 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_61 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_62 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_63 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_64 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_65 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_66 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_67 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_68 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_69 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_70 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_71 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_72 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_73 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_74 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_75 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_76 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_77 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_78 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_79 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_80 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_81 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_82 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_83 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_84 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_85 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_86 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_87 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_88 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_89 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_90 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_91 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_92 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_93 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_94 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_95 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_96 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_97 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_98 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_99 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_100 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_101 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_102 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_103 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_104 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_105 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_106 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_107 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_108 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_109 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_110 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_111 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_112 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_113 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_114 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_115 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_116 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_117 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_118 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_119 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_120 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_121 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_122 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_123 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_124 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_125 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_126 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_127 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_128 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_129 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_130 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_131 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_132 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_133 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_134 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_135 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_136 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_138 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_139 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_140 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_141 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_142 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_143 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_144 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_145 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_146 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_147 | 0.0 | 1.0 | 0.0 |
| DLJAOKGB_148 | 1.0 | 0.0 | 1.0 |
| DLJAOKGB_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)