Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCPEANGK_109 | 5870 | 7807 | tet(W) | ARO:3000194 | tet(W) | 96.55 | 100.94 | AJ222769.3 |
| OCPEANGK_14 | 231 | 716 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OCPEANGK_14 | 231 | 716 | lnu(A) | Lincomycin | 98.97 | 100.00 | M14039 |
| OCPEANGK_109 | 5870 | 7782 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.85 | 99.64 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCPEANGK_14 | 231 | 713 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| OCPEANGK_109 | 5870 | 7783 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 99.84 | WP_003672618.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OCPEANGK_121 | 6075 | 5881 | CspA | 6.98e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OCPEANGK_1 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_2 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_3 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_4 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_5 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_6 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_7 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_8 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_9 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_10 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_11 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_12 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_13 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_14 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_16 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_17 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_18 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_19 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_21 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_22 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_23 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_24 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_25 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_26 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_27 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_28 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_29 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_30 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_31 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_32 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_33 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_34 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_35 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_36 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_37 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_44 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_49 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_50 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_51 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_52 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_53 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_54 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_55 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_56 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_57 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_58 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_59 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_60 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_61 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_62 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_63 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_64 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_65 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_66 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_67 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_68 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_69 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_70 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_71 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_72 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_73 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_74 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_75 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_76 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_77 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_78 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_79 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_80 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_81 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_82 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_83 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_84 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_85 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_86 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_87 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_88 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_89 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_90 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_91 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_92 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_93 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_94 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_95 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_96 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_97 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_98 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_99 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_100 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_101 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_102 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_103 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_104 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_105 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_106 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_107 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_108 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_109 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_110 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_111 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_112 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_113 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_114 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_115 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_116 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_117 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_118 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_119 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_120 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_121 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_122 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_123 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_124 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_125 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_126 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_127 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_128 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_129 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_130 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_131 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_132 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_133 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_134 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_135 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_136 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_137 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_138 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_139 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_140 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_141 | 0.0 | 1.0 | 0.0 |
| OCPEANGK_142 | 1.0 | 0.0 | 1.0 |
| OCPEANGK_143 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OCPEANGK_110 | 8771 | 20182 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4606, VOG4632, VOG0650 |
Phigaro v2.4.0 (Database: Jan. 2024 release)