Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EBAIGKFJ_20 | 20137 | 19943 | CspA | 2.25e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EBAIGKFJ_1 | 100075 | 101049 | repUS67 | 981 / 1039 | 89.60 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EBAIGKFJ_1 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_2 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_6 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_10 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_11 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_12 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_13 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_14 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_16 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_17 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_18 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_19 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_20 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_21 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_22 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_23 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_24 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_25 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_26 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_27 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_28 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_29 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_30 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_31 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_32 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_33 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_34 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_35 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_36 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_37 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_38 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_39 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_40 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_41 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_43 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_44 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_45 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_46 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_47 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_48 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_49 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_50 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_51 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_52 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_53 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_54 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_55 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_56 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_57 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_58 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_59 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_60 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_61 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_62 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_63 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_64 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_66 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_68 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_69 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_70 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_71 | 1.0 | 0.0 | 1.0 |
| EBAIGKFJ_72 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_74 | 0.0 | 1.0 | 0.0 |
| EBAIGKFJ_75 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EBAIGKFJ_1 | 74661 | 96054 | False | Siphoviridae | VOG0054, VOG0753, VOG0648, VOG8355, VOG10609, VOG4783, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG6246, VOG6524, VOG6031, VOG5721 |
| EBAIGKFJ_40 | 47047 | 75058 | False | Myoviridae | VOG8294, VOG0703, VOG9888, VOG8917, VOG3298, VOG6298, VOG10263, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG4972, VOG0198 |
| EBAIGKFJ_40 | 79837 | 85634 | False | Siphoviridae | VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0535, VOG9667, VOG8611 |
| EBAIGKFJ_75 | 48774 | 60303 | False | Siphoviridae | VOG5148, VOG5818, VOG0918, VOG7188, VOG0275, VOG0862, VOG9667, VOG3622, VOG0181, VOG4799, VOG4799 |
Phigaro v2.4.0 (Database: Jan. 2024 release)