Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GNEHDOCD_1 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_2 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_9 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_10 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_11 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_12 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_13 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_14 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_15 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_16 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_17 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_18 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_19 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_20 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_21 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_22 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_23 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_24 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_25 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_26 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_27 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_28 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_29 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_30 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_31 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_32 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_33 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_34 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_35 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_36 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_37 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_38 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_39 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_40 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_41 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_42 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_43 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_44 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_45 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_46 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_47 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_48 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_49 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_50 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_51 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_52 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_53 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_54 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_55 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_56 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_57 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_58 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_59 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_60 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_61 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_62 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_63 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_64 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_65 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_66 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_67 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_68 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_69 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_70 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_71 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_72 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_73 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_74 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_75 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_76 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_77 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_78 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_79 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_80 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_81 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_82 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_83 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_84 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_85 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_86 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_87 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_88 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_89 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_90 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_91 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_92 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_93 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_94 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_95 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_97 | 0.0 | 1.0 | 0.0 |
| GNEHDOCD_99 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_100 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_102 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_103 | 1.0 | 0.0 | 1.0 |
| GNEHDOCD_104 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GNEHDOCD_22 | 73308 | 76599 | False | Myoviridae | VOG5380, |
Phigaro v2.4.0 (Database: Jan. 2024 release)