Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MGMFLNMF_83 | 49821 | 49624 | CspA | 1.76e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| MGMFLNMF_83 | 49821 | 49627 | CspR | 7.62e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MGMFLNMF_1 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_2 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_3 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_4 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_5 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_6 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_7 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_8 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_9 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_11 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_22 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_33 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_44 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_55 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_56 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_57 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_58 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_59 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_60 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_61 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_62 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_63 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_64 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_65 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_66 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_67 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_68 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_69 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_70 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_71 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_72 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_73 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_74 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_75 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_76 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_77 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_78 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_79 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_80 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_81 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_82 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_83 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_84 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_85 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_86 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_87 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_88 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_89 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_90 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_91 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_92 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_93 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_94 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_95 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_96 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_97 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_98 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_99 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_100 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_101 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_102 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_103 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_104 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_105 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_106 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_107 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_108 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_109 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_110 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_111 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_112 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_113 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_114 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_115 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_116 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_117 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_118 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_119 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_120 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_121 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_122 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_123 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_124 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_125 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_126 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_127 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_128 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_129 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_130 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_131 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_132 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_133 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_134 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_135 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_136 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_137 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_138 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_139 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_140 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_141 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_142 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_145 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_146 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_147 | 0.0 | 1.0 | 0.0 |
| MGMFLNMF_148 | 1.0 | 0.0 | 1.0 |
| MGMFLNMF_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MGMFLNMF_94 | 37092 | 59148 | False | Myoviridae / Siphoviridae | VOG1292, VOG10457, VOG1176, VOG8295, VOG0025, VOG6085, VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235 |
Phigaro v2.4.0 (Database: Jan. 2024 release)