Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJAMIPPH_1 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_2 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_3 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_4 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_6 | 1.0 | 0.0 | 1.0 |
| BJAMIPPH_7 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_8 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_10 | 1.0 | 0.0 | 1.0 |
| BJAMIPPH_11 | 1.0 | 0.0 | 1.0 |
| BJAMIPPH_12 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_13 | 1.0 | 0.0 | 1.0 |
| BJAMIPPH_15 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_23 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_27 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_34 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_38 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_45 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_50 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_56 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_62 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_67 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_71 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_72 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_73 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_74 | 0.0 | 1.0 | 0.0 |
| BJAMIPPH_75 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJAMIPPH_71 | 71835 | 93584 | False | Siphoviridae | VOG0198, VOG10142, VOG3699, VOG0720, VOG4564, VOG9289, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4910, VOG5283, VOG5008, VOG8224, VOG0861 |
Phigaro v2.4.0 (Database: Jan. 2024 release)