Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MAKDMGGG_129 | 42589 | 42395 | CspA | 8.20e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MAKDMGGG_1 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_2 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_3 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_4 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_5 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_6 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_7 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_8 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_9 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_10 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_11 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_12 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_13 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_14 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_15 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_16 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_17 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_18 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_19 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_20 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_21 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_23 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_24 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_25 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_26 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_27 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_28 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_30 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_31 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_32 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_33 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_34 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_35 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_39 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_46 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_51 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_57 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_63 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_68 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_75 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_79 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_87 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_98 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_101 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_110 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_112 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_113 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_123 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_124 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_128 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_129 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_130 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_131 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_132 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_133 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_134 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_135 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_136 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_137 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_138 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_139 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_140 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_141 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_142 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_143 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_144 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_145 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_146 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_147 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_148 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_149 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_150 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_151 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_152 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_153 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_154 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_155 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_156 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_157 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_158 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_159 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_160 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_161 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_162 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_163 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_164 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_165 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_166 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_167 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_168 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_169 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_170 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_171 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_172 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_173 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_174 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_175 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_176 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_177 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_178 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_179 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_180 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_181 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_182 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_183 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_184 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_185 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_186 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_187 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_188 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_189 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_190 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_191 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_192 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_193 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_194 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_195 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_196 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_197 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_198 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_199 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_200 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_201 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_202 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_203 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_204 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_205 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_206 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_207 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_208 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_209 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_210 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_211 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_212 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_213 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_214 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_215 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_216 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_217 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_218 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_219 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_220 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_221 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_222 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_223 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_224 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_225 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_226 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_227 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_228 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_229 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_230 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_231 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_232 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_233 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_234 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_235 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_236 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_237 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_238 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_239 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_240 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_241 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_242 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_243 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_244 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_245 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_246 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_247 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_248 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_249 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_250 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_251 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_252 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_253 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_254 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_255 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_256 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_257 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_258 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_259 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_260 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_261 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_262 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_263 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_264 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_265 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_266 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_267 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_268 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_269 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_270 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_271 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_272 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_273 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_274 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_275 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_276 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_277 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_278 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_279 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_280 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_281 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_282 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_283 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_284 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_285 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_286 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_287 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_288 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_289 | 1.0 | 0.0 | 1.0 |
| MAKDMGGG_290 | 0.0 | 1.0 | 0.0 |
| MAKDMGGG_291 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MAKDMGGG_39 | 5205 | 23131 | False | Siphoviridae | VOG1335, VOG0083, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG9503 |
| MAKDMGGG_63 | 11486 | 15428 | False | Siphoviridae | VOG0682, VOG1521, VOG4602, VOG6495, VOG4552, VOG2776 |
| MAKDMGGG_123 | 3832 | 18144 | False | Siphoviridae | VOG4887, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556 |
| MAKDMGGG_177 | 18333 | 25146 | False | Podoviridae | VOG3738, VOG0189, VOG5235, VOG0083 |
| MAKDMGGG_291 | 3488 | 24162 | False | Siphoviridae | VOG0703, VOG0641, VOG5070, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG4555, VOG0638, VOG4564, VOG0720, VOG10227 |
Phigaro v2.4.0 (Database: Jan. 2024 release)