Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FOAOADIP_224438744581CspA8.19e-29cold shock protein84.6198.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
FOAOADIP_110.01.00.0
FOAOADIP_130.01.00.0
FOAOADIP_220.01.00.0
FOAOADIP_290.01.00.0
FOAOADIP_300.01.00.0
FOAOADIP_310.01.00.0
FOAOADIP_320.01.00.0
FOAOADIP_330.01.00.0
FOAOADIP_340.01.00.0
FOAOADIP_360.01.00.0
FOAOADIP_370.01.00.0
FOAOADIP_380.01.00.0
FOAOADIP_390.01.00.0
FOAOADIP_400.01.00.0
FOAOADIP_410.01.00.0
FOAOADIP_420.01.00.0
FOAOADIP_430.01.00.0
FOAOADIP_440.01.00.0
FOAOADIP_450.01.00.0
FOAOADIP_470.01.00.0
FOAOADIP_480.01.00.0
FOAOADIP_490.01.00.0
FOAOADIP_500.01.00.0
FOAOADIP_510.01.00.0
FOAOADIP_520.01.00.0
FOAOADIP_530.01.00.0
FOAOADIP_540.01.00.0
FOAOADIP_550.01.00.0
FOAOADIP_560.01.00.0
FOAOADIP_580.01.00.0
FOAOADIP_591.00.01.0
FOAOADIP_600.01.00.0
FOAOADIP_610.01.00.0
FOAOADIP_620.01.00.0
FOAOADIP_630.01.00.0
FOAOADIP_640.01.00.0
FOAOADIP_650.01.00.0
FOAOADIP_660.01.00.0
FOAOADIP_671.00.01.0
FOAOADIP_690.01.00.0
FOAOADIP_700.01.00.0
FOAOADIP_710.01.00.0
FOAOADIP_730.01.00.0
FOAOADIP_741.00.01.0
FOAOADIP_750.01.00.0
FOAOADIP_760.01.00.0
FOAOADIP_771.00.01.0
FOAOADIP_801.00.01.0
FOAOADIP_810.01.00.0
FOAOADIP_830.01.00.0
FOAOADIP_851.00.01.0
FOAOADIP_861.00.01.0
FOAOADIP_870.01.00.0
FOAOADIP_891.00.01.0
FOAOADIP_910.01.00.0
FOAOADIP_921.00.01.0
FOAOADIP_990.01.00.0
FOAOADIP_1110.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
FOAOADIP_391779327830FalseSiphoviridaeVOG6914, VOG4602, VOG8520, VOG2124, VOG1564, VOG9469, VOG0707, VOG3478, VOG7812, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799, VOG0686, VOG1183, VOG2388, VOG4693
FOAOADIP_394946180205FalseSiphoviridaeVOG0866, VOG4841, VOG4581, VOG4544, VOG1345, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG10972, VOG1050, VOG9997, VOG4856, VOG4334, VOG4705, VOG9998, VOG1637, VOG0054
FOAOADIP_401858944869FalseSiphoviridaeVOG0686, VOG9927, VOG1183, VOG9500, VOG0198, VOG1422, VOG4618, VOG0611, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG6163, VOG0801, VOG3462, VOG1224, VOG4660

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements