Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FMMKPPGP_52 | 67438 | 67244 | CspA | 1.18e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FMMKPPGP_28 | 2166 | 3196 | repUS67 | 1047 / 1039 | 85.29 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMMKPPGP_1 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_3 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_4 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_5 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_6 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_7 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_8 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_9 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_10 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_11 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_12 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_13 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_14 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_15 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_16 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_17 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_18 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_19 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_20 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_21 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_22 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_23 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_25 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_26 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_27 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_28 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_29 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_31 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_32 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_33 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_34 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_36 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_37 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_38 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_39 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_40 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_41 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_42 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_43 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_44 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_45 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_47 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_48 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_49 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_50 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_51 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_52 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_53 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_54 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_55 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_56 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_58 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_59 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_60 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_61 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_62 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_64 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_69 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_72 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_80 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_84 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_91 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_96 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_102 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_106 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_113 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_115 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_116 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_117 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_118 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_119 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_120 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_121 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_123 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_124 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_125 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_126 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_127 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_128 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_129 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_130 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_131 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_132 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_134 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_135 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_136 | 1.0 | 0.0 | 1.0 |
| FMMKPPGP_137 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_138 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_139 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_140 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_141 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_142 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_143 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_145 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_146 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_147 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_148 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_149 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_150 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_151 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_152 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_153 | 0.0 | 1.0 | 0.0 |
| FMMKPPGP_154 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMMKPPGP_4 | 38947 | 53035 | False | Siphoviridae | VOG0542, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204, VOG0198, VOG4714 |
| FMMKPPGP_4 | 71326 | 103116 | False | Siphoviridae | VOG0862, VOG6495, VOG3622, VOG3478, VOG0321, VOG4548, VOG6394, VOG0322, VOG6545, VOG4632, VOG4609, VOG5664, VOG5016, VOG0327, VOG2352, VOG6495, VOG3307, VOG4690, VOG0198, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG6163, VOG0083, VOG5070 |
| FMMKPPGP_28 | 5892 | 27263 | False | Siphoviridae | VOG5722, VOG4544, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG6036, VOG7629, VOG9713, VOG5534, VOG4783, VOG10609, VOG9091, VOG0648, VOG0753, VOG0054 |
| FMMKPPGP_106 | 2554 | 25634 | False | Siphoviridae | VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG4545, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
| FMMKPPGP_128 | 3769 | 23300 | False | Siphoviridae | VOG10227, VOG0720, VOG4564, VOG0638, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG5070 |
Phigaro v2.4.0 (Database: Jan. 2024 release)