Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IIICJCIH_33 | 49831 | 50025 | CspA | 1.11e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IIICJCIH_128 | 7056 | 8086 | repUS67 | 1047 / 1039 | 85.29 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IIICJCIH_3 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_4 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_5 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_6 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_7 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_8 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_9 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_10 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_11 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_12 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_13 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_14 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_16 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_17 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_18 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_19 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_20 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_21 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_22 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_23 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_25 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_26 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_27 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_28 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_29 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_30 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_31 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_32 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_33 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_34 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_36 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_37 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_38 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_39 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_40 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_41 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_42 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_43 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_44 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_45 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_47 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_48 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_49 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_50 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_51 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_52 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_53 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_54 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_55 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_58 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_66 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_78 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_90 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_97 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_98 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_99 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_100 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_102 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_103 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_104 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_105 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_106 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_107 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_108 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_109 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_110 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_111 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_113 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_114 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_115 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_116 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_117 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_118 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_119 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_120 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_121 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_122 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_124 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_125 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_126 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_127 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_128 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_129 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_130 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_131 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_132 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_133 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_135 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_136 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_137 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_138 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_139 | 1.0 | 0.0 | 1.0 |
| IIICJCIH_140 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_141 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_142 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_143 | 0.0 | 1.0 | 0.0 |
| IIICJCIH_144 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IIICJCIH_21 | 2554 | 25634 | False | Siphoviridae | VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG4545, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
| IIICJCIH_98 | 1285 | 23661 | False | Siphoviridae | VOG0641, VOG0648, VOG5007, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198 |
| IIICJCIH_113 | 2810 | 22341 | False | Siphoviridae | VOG0641, VOG5070, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG4555, VOG0638, VOG4564, VOG0720 |
| IIICJCIH_116 | 105906 | 137696 | False | Siphoviridae | VOG0862, VOG6495, VOG3622, VOG3478, VOG0321, VOG4548, VOG6394, VOG0322, VOG6545, VOG4632, VOG4609, VOG5664, VOG5016, VOG0327, VOG2352, VOG6495, VOG3307, VOG4690, VOG0198, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG6163, VOG0083, VOG5070 |
| IIICJCIH_122 | 11619 | 18059 | False | Unknown | VOG3304, VOG0862, VOG8520, VOG0052, VOG4552, VOG0979, VOG6450, VOG11003, VOG11003, VOG1309 |
| IIICJCIH_128 | 10582 | 32153 | False | Siphoviridae | VOG5722, VOG4544, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG6036, VOG7629, VOG9713, VOG5534, VOG4783, VOG10609, VOG9091, VOG0648, VOG0753, VOG0054 |
| IIICJCIH_128 | 94734 | 96803 | False | Unknown | VOG4549, VOG1344, VOG0991 |
Phigaro v2.4.0 (Database: Jan. 2024 release)