Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MGBFLLDO_94 | 359 | 165 | CspA | 5.93e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MGBFLLDO_1 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_3 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_4 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_5 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_6 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_7 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_8 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_9 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_11 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_12 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_13 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_14 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_15 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_16 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_17 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_18 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_19 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_20 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_21 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_22 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_23 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_25 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_26 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_27 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_28 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_29 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_30 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_31 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_32 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_33 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_34 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_36 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_37 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_38 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_39 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_40 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_41 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_42 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_43 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_44 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_45 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_48 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_49 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_50 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_51 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_52 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_58 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_61 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_73 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_85 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_92 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_93 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_94 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_95 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_96 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_97 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_98 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_99 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_100 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_102 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_103 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_104 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_105 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_106 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_107 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_108 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_109 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_110 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_111 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_113 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_114 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_115 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_116 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_117 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_118 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_119 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_120 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_121 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_122 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_124 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_125 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_126 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_127 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_128 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_129 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_130 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_131 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_132 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_133 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_135 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_136 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_137 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_138 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_139 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_140 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_141 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_142 | 1.0 | 0.0 | 1.0 |
| MGBFLLDO_143 | 0.0 | 1.0 | 0.0 |
| MGBFLLDO_144 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MGBFLLDO_106 | 3505 | 23868 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG6163, VOG4545, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556 |
| MGBFLLDO_107 | 2078 | 18415 | False | Siphoviridae | VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG5070, VOG0641, VOG0703 |
Phigaro v2.4.0 (Database: Jan. 2024 release)