Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BEBHOAMA_33359165CspA5.55e-29cold shock protein84.6198.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BEBHOAMA_90.01.00.0
BEBHOAMA_130.01.00.0
BEBHOAMA_210.01.00.0
BEBHOAMA_260.01.00.0
BEBHOAMA_280.01.00.0
BEBHOAMA_290.01.00.0
BEBHOAMA_300.01.00.0
BEBHOAMA_310.01.00.0
BEBHOAMA_320.01.00.0
BEBHOAMA_330.01.00.0
BEBHOAMA_340.01.00.0
BEBHOAMA_351.00.01.0
BEBHOAMA_360.01.00.0
BEBHOAMA_380.01.00.0
BEBHOAMA_390.01.00.0
BEBHOAMA_400.01.00.0
BEBHOAMA_410.01.00.0
BEBHOAMA_420.01.00.0
BEBHOAMA_430.01.00.0
BEBHOAMA_440.01.00.0
BEBHOAMA_450.01.00.0
BEBHOAMA_460.01.00.0
BEBHOAMA_471.00.01.0
BEBHOAMA_490.01.00.0
BEBHOAMA_500.01.00.0
BEBHOAMA_510.01.00.0
BEBHOAMA_520.01.00.0
BEBHOAMA_530.01.00.0
BEBHOAMA_540.01.00.0
BEBHOAMA_550.01.00.0
BEBHOAMA_560.01.00.0
BEBHOAMA_570.01.00.0
BEBHOAMA_581.00.01.0
BEBHOAMA_601.00.01.0
BEBHOAMA_610.01.00.0
BEBHOAMA_620.01.00.0
BEBHOAMA_630.01.00.0
BEBHOAMA_641.00.01.0
BEBHOAMA_650.01.00.0
BEBHOAMA_660.01.00.0
BEBHOAMA_670.01.00.0
BEBHOAMA_680.01.00.0
BEBHOAMA_691.00.01.0
BEBHOAMA_720.01.00.0
BEBHOAMA_730.01.00.0
BEBHOAMA_740.01.00.0
BEBHOAMA_750.01.00.0
BEBHOAMA_760.01.00.0
BEBHOAMA_771.00.01.0
BEBHOAMA_781.00.01.0
BEBHOAMA_791.00.01.0
BEBHOAMA_801.00.01.0
BEBHOAMA_821.00.01.0
BEBHOAMA_830.01.00.0
BEBHOAMA_841.00.01.0
BEBHOAMA_850.01.00.0
BEBHOAMA_861.00.01.0
BEBHOAMA_871.00.01.0
BEBHOAMA_880.01.00.0
BEBHOAMA_891.00.01.0
BEBHOAMA_901.00.01.0
BEBHOAMA_911.00.01.0
BEBHOAMA_941.00.01.0
BEBHOAMA_951.00.01.0
BEBHOAMA_961.00.01.0
BEBHOAMA_970.01.00.0
BEBHOAMA_981.00.01.0
BEBHOAMA_991.00.01.0
BEBHOAMA_1001.00.01.0
BEBHOAMA_1011.00.01.0
BEBHOAMA_1021.00.01.0
BEBHOAMA_1041.00.01.0
BEBHOAMA_1050.01.00.0
BEBHOAMA_1090.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BEBHOAMA_35350528608FalseSiphoviridaeVOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG6163, VOG4545, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG0866, VOG6183, VOG0198, VOG0686
BEBHOAMA_47587922815FalseSiphoviridaeVOG5361, VOG9998, VOG0703, VOG0641, VOG5070, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG1353

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements