Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMONAILB_28 | 4522 | 5166 | vatE | ARO:3002844 | vatE | 97.20 | 100.00 | AF242872.1 |
| FMONAILB_87 | 1274 | 2011 | ErmB | ARO:3000375 | ErmB | 98.37 | 98.79 | AF242872.1 |
| FMONAILB_52 | 291 | 2216 | tet(W) | ARO:3000194 | tet(W) | 96.87 | 100.31 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FMONAILB_87 | 1274 | 2011 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | U86375 |
| FMONAILB_52 | 304 | 2216 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.01 | 99.64 | FN396364 |
| FMONAILB_28 | 4522 | 5166 | vat(E) | Dalfopristin, Pristinamycin IIA, Virginiamycin M | 96.43 | 100.00 | AJ488494 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMONAILB_52 | 303 | 2216 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 99.84 | WP_000691721.1 |
| FMONAILB_87 | 1274 | 2008 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_001038790.1 |
| FMONAILB_28 | 4522 | 5163 | vat(E) | streptogramin A O-acetyltransferase Vat(E) | BLASTX | 99.53 | 100.00 | WP_063856929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMONAILB_1 | 0.0 | 1.0 | 0.0 |
| FMONAILB_2 | 0.0 | 1.0 | 0.0 |
| FMONAILB_3 | 0.0 | 1.0 | 0.0 |
| FMONAILB_4 | 0.0 | 1.0 | 0.0 |
| FMONAILB_5 | 0.0 | 1.0 | 0.0 |
| FMONAILB_6 | 1.0 | 0.0 | 1.0 |
| FMONAILB_7 | 1.0 | 0.0 | 1.0 |
| FMONAILB_8 | 0.0 | 1.0 | 0.0 |
| FMONAILB_9 | 0.0 | 1.0 | 0.0 |
| FMONAILB_10 | 1.0 | 0.0 | 1.0 |
| FMONAILB_11 | 1.0 | 0.0 | 1.0 |
| FMONAILB_12 | 0.0 | 1.0 | 0.0 |
| FMONAILB_13 | 0.0 | 1.0 | 0.0 |
| FMONAILB_15 | 1.0 | 0.0 | 1.0 |
| FMONAILB_16 | 1.0 | 0.0 | 1.0 |
| FMONAILB_17 | 0.0 | 1.0 | 0.0 |
| FMONAILB_18 | 1.0 | 0.0 | 1.0 |
| FMONAILB_19 | 0.0 | 1.0 | 0.0 |
| FMONAILB_20 | 1.0 | 0.0 | 1.0 |
| FMONAILB_21 | 1.0 | 0.0 | 1.0 |
| FMONAILB_22 | 0.0 | 1.0 | 0.0 |
| FMONAILB_23 | 0.0 | 1.0 | 0.0 |
| FMONAILB_24 | 1.0 | 0.0 | 1.0 |
| FMONAILB_25 | 0.0 | 1.0 | 0.0 |
| FMONAILB_26 | 0.0 | 1.0 | 0.0 |
| FMONAILB_27 | 0.0 | 1.0 | 0.0 |
| FMONAILB_28 | 0.0 | 1.0 | 0.0 |
| FMONAILB_29 | 0.0 | 1.0 | 0.0 |
| FMONAILB_30 | 0.0 | 1.0 | 0.0 |
| FMONAILB_31 | 1.0 | 0.0 | 1.0 |
| FMONAILB_32 | 0.0 | 1.0 | 0.0 |
| FMONAILB_33 | 0.0 | 1.0 | 0.0 |
| FMONAILB_34 | 0.0 | 1.0 | 0.0 |
| FMONAILB_35 | 0.0 | 1.0 | 0.0 |
| FMONAILB_36 | 1.0 | 0.0 | 1.0 |
| FMONAILB_37 | 0.0 | 1.0 | 0.0 |
| FMONAILB_38 | 0.0 | 1.0 | 0.0 |
| FMONAILB_39 | 0.0 | 1.0 | 0.0 |
| FMONAILB_40 | 1.0 | 0.0 | 1.0 |
| FMONAILB_41 | 0.0 | 1.0 | 0.0 |
| FMONAILB_42 | 0.0 | 1.0 | 0.0 |
| FMONAILB_43 | 0.0 | 1.0 | 0.0 |
| FMONAILB_44 | 1.0 | 0.0 | 1.0 |
| FMONAILB_45 | 0.0 | 1.0 | 0.0 |
| FMONAILB_46 | 0.0 | 1.0 | 0.0 |
| FMONAILB_47 | 0.0 | 1.0 | 0.0 |
| FMONAILB_48 | 0.0 | 1.0 | 0.0 |
| FMONAILB_49 | 0.0 | 1.0 | 0.0 |
| FMONAILB_50 | 1.0 | 0.0 | 1.0 |
| FMONAILB_51 | 0.0 | 1.0 | 0.0 |
| FMONAILB_52 | 1.0 | 0.0 | 1.0 |
| FMONAILB_54 | 0.0 | 1.0 | 0.0 |
| FMONAILB_55 | 0.0 | 1.0 | 0.0 |
| FMONAILB_56 | 0.0 | 1.0 | 0.0 |
| FMONAILB_57 | 1.0 | 0.0 | 1.0 |
| FMONAILB_58 | 0.0 | 1.0 | 0.0 |
| FMONAILB_59 | 0.0 | 1.0 | 0.0 |
| FMONAILB_60 | 0.0 | 1.0 | 0.0 |
| FMONAILB_61 | 1.0 | 0.0 | 1.0 |
| FMONAILB_62 | 0.0 | 1.0 | 0.0 |
| FMONAILB_63 | 0.0 | 1.0 | 0.0 |
| FMONAILB_64 | 0.0 | 1.0 | 0.0 |
| FMONAILB_65 | 0.0 | 1.0 | 0.0 |
| FMONAILB_66 | 0.0 | 1.0 | 0.0 |
| FMONAILB_67 | 0.0 | 1.0 | 0.0 |
| FMONAILB_69 | 0.0 | 1.0 | 0.0 |
| FMONAILB_70 | 0.0 | 1.0 | 0.0 |
| FMONAILB_71 | 1.0 | 0.0 | 1.0 |
| FMONAILB_72 | 0.0 | 1.0 | 0.0 |
| FMONAILB_73 | 1.0 | 0.0 | 1.0 |
| FMONAILB_74 | 0.0 | 1.0 | 0.0 |
| FMONAILB_75 | 1.0 | 0.0 | 1.0 |
| FMONAILB_76 | 1.0 | 0.0 | 1.0 |
| FMONAILB_77 | 0.0 | 1.0 | 0.0 |
| FMONAILB_78 | 0.0 | 1.0 | 0.0 |
| FMONAILB_79 | 0.0 | 1.0 | 0.0 |
| FMONAILB_80 | 0.0 | 1.0 | 0.0 |
| FMONAILB_81 | 0.0 | 1.0 | 0.0 |
| FMONAILB_82 | 0.0 | 1.0 | 0.0 |
| FMONAILB_83 | 0.0 | 1.0 | 0.0 |
| FMONAILB_84 | 1.0 | 0.0 | 1.0 |
| FMONAILB_85 | 1.0 | 0.0 | 1.0 |
| FMONAILB_86 | 0.0 | 1.0 | 0.0 |
| FMONAILB_87 | 1.0 | 0.0 | 1.0 |
| FMONAILB_88 | 0.0 | 1.0 | 0.0 |
| FMONAILB_89 | 1.0 | 0.0 | 1.0 |
| FMONAILB_90 | 0.0 | 1.0 | 0.0 |
| FMONAILB_91 | 0.0 | 1.0 | 0.0 |
| FMONAILB_92 | 1.0 | 0.0 | 1.0 |
| FMONAILB_93 | 0.0 | 1.0 | 0.0 |
| FMONAILB_94 | 0.0 | 1.0 | 0.0 |
| FMONAILB_95 | 0.0 | 1.0 | 0.0 |
| FMONAILB_96 | 0.0 | 1.0 | 0.0 |
| FMONAILB_98 | 0.0 | 1.0 | 0.0 |
| FMONAILB_99 | 0.0 | 1.0 | 0.0 |
| FMONAILB_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMONAILB_46 | 16549 | 54477 | False | Myoviridae | VOG3870, VOG0862, VOG9667, VOG3622, VOG7236, VOG7225, VOG2228, VOG0321, VOG0283, VOG4566, VOG0189, VOG0275, VOG0195, VOG4579, VOG8177, VOG4693, VOG0634, VOG0198, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG4711, VOG3435, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG4763, VOG6540, VOG9945, VOG4705, VOG8917, VOG9888 |
Phigaro v2.4.0 (Database: Jan. 2024 release)